RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 S100GP29377 79 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 IL2P60568 153 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 RESTQ13127 1097 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 IFRD1O00458 451 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 HIST1H2ABP04908 130 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 IFNAR1P17181 557 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 ALDH7A1P49419 539 aaKnown RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 TGM3Q08188 693 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 TRAF3Q13114 568 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 KCNT1Q5JUK3 1230 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 SPANXN2Q5MJ10 180 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 HIST3H2AQ7L7L0 130 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 HIST1H2ACQ93077 130 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 TRIT1Q9H3H1 467 aaKnown RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 ADSLP30566 484 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 FAM171BQ6P995 826 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 TRMT11Q7Z4G4 463 aaKnown RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 CLCC1Q96S66 551 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 CAB39LQ9H9S4 337 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 EIF3HO15372 352 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 TEX33O43247 280 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 KLHL28Q9NXS3 571 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 ERI2A8K979 691 aaKnown RBP16.89■□□□□ 0.3
PTCH1-201ENST00000331920 LSP1P33241 339 aa16.89■□□□□ 0.3
PTCH1-201ENST00000331920 DAW1Q8N136 415 aa16.89■□□□□ 0.3
PTCH1-201ENST00000331920 TRPV3Q8NET8 790 aa16.89■□□□□ 0.3
PTCH1-201ENST00000331920 HEY2Q9UBP5 337 aa16.89■□□□□ 0.3
PTCH1-201ENST00000331920 NEDD4P46934 1319 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 LIN7AO14910 233 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 MSH4O15457 936 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 KLHL41O60662 606 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 IFNA14P01570 189 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 TAB1Q15750 504 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 SCUBE1Q8IWY4 988 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 DSN1Q9H410 356 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ARHGEF10O15013 1369 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 H7C0S8 307 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 MT-CO1P00395 513 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 GEMIN4P57678 1058 aaKnown RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 SV2CQ496J9 727 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 TCHHL1Q5QJ38 904 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 IER5Q5VY09 327 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ISLR2Q6UXK2 745 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 TDRD5Q8NAT2 981 aaKnown RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 PI4K2AQ9BTU6 479 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 CLPBQ9H078 707 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 MRGBPQ9NV56 204 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 COPG2Q9UBF2 871 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF37AP17032 561 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 RIBC2Q9H4K1 309 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 WDR41Q9HAD4 459 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 LINC00523Q86TU6 105 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 MLH3Q9UHC1 1453 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 LARGE1O95461 756 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 LTFP02788 710 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 SERPINB12Q96P63 405 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 BBS4Q96RK4 519 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 TRIM10Q9UDY6 481 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
PTCH1-201ENST00000331920 CCDC189A1A4V9 331 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ASB14A6NK59 587 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ITIH2P19823 946 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 TMEM132BQ14DG7 1078 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 SLC44A5Q8NCS7 719 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 RHBGQ9H310 441 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ACAD9Q9H845 621 aa16.89■□□□□ 0.29
PTCH1-201ENST00000331920 ECE2O60344 883 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 SLC2A4P14672 509 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 MTF1Q14872 753 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 C2CD6Q53TS8 623 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 C8orf4Q9NR00 106 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 ANO9A1A5B4 782 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 OR7A10O76100 309 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 FAM120BQ96EK7 910 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 CCNT2O60583 730 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 HK2P52789 917 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 STXBP1P61764 594 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 NT5C1AQ9BXI3 368 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF335Q9H4Z2 1342 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 EPHB2P29323 1055 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 STAT5BP51692 787 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 MYBPC1Q00872 1141 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 ZCCHC7Q8N3Z6 543 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 DGCR6LQ9BY27 220 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 TNKS2Q9H2K2 1166 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 KLK14Q9P0G3 267 aa16.88■□□□□ 0.29
PTCH1-201ENST00000331920 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 BCLAF3A2AJT9 711 aaKnown RBP16.88■□□□□ 0.29
PTCH1-201ENST00000331920 GPD1P21695 349 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms