RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CTNNAL1Q9UBT7 734 aa11.45□□□□□ -0.58
MSH6-201ENST00000234420 POTEMA6NI47 508 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 PLEKHA8P1O95397 391 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 MAGEA10P43363 369 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 PSEN2P49810 448 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 PRKAA1Q13131 559 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 DPP10Q8N608 796 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 E2F7Q96AV8 911 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ZFRQ96KR1 1074 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 CCDC115Q96NT0 180 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 PLEKHG4BQ96PX9 1271 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 DGCR6LQ9BY27 220 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ANTXR1Q9H6X2 564 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ANKRD12Q6UB98 2062 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ZW10O43264 779 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 HSD17B4P51659 736 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 MAP1SQ66K74 1059 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 DET1Q7L5Y6 550 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 MTFMTQ96DP5 389 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 PUS7LQ9H0K6 701 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 PHTF1Q9UMS5 762 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 APOL1O14791 398 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 NME5P56597 212 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 USP10Q14694 798 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 C16orf59Q7L2K0 433 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 OTOAQ7RTW8 1153 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 TMEM110Q86TL2 294 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 NSUN7Q8NE18 718 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 SHCBP1Q8NEM2 672 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 GIPC3Q8TF64 312 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 KIAA1586Q9HCI6 787 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 LIMA1Q9UHB6 759 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 NDRG2Q9UN36 371 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 SPACA6W5XKT8 324 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 STAU1O95793 577 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 EPHB3P54753 998 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 CDH6P55285 790 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 CHRNB3Q05901 458 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 TXNRD1Q16881 649 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 TPGS1Q6ZTW0 290 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 TRMT11Q7Z4G4 463 aaKnown RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 ARRDC4Q8NCT1 418 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 RMND5BQ96G75 393 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 OSBPL5Q9H0X9 879 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 RRN3Q9NYV6 651 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 CRLS1Q9UJA2 301 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 C15orf41Q9Y2V0 281 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 TRIM3O75382 744 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 TNFAIP8O95379 198 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 GH1P01241 217 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 RAD23AP54725 363 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 STX4Q12846 297 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 COLEC12Q5KU26 742 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 FAR2Q96K12 515 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 C1orf50Q9BV19 199 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
MSH6-201ENST00000234420 SMPD4Q9NXE4 827 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 MAFFQ9ULX9 164 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 GPSM3Q9Y4H4 160 aa11.44□□□□□ -0.58
MSH6-201ENST00000234420 SDC4P31431 198 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 ZNF554Q86TJ5 538 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 FAM167AQ96KS9 214 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MYLK2Q9H1R3 596 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 ATXN3LQ9H3M9 355 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 FBXO40Q9UH90 709 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MLXQ9UH92 298 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 STAG3L1P0CL83 205 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 CTNNB1P35222 781 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 NCKAP1LP55160 1127 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 EIF4A1P60842 406 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 ITIH4Q14624 930 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 CARTPTQ16568 116 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 C3orf62Q6ZUJ4 267 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 RORBQ92753 470 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 XPO7Q9UIA9 1087 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 STAP1Q9ULZ2 295 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 UBOX5O94941 541 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 VIL1P09327 827 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 TIGD7Q6NT04 549 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 ELL3Q9HB65 397 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 CDY2AQ9Y6F7 541 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 CDY1Q9Y6F8 540 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 EFCAB10A6NFE3 127 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MSH4O15457 936 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 DPEP1P16444 411 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 CBFBQ13951 182 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms