RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TCRBV9S1A1TA0A576 114 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 CASQ2O14958 399 aaPredicted RBP18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 RPL22P35268 128 aaKnown RBP18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 RPL7AP62424 266 aaKnown RBP18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 NADK2Q4G0N4 442 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 TFDP3Q5H9I0 405 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 RALGPS1Q5JS13 557 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 TXNRD3NBQ6F5E7 133 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 TMC7Q7Z402 723 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 PHF13Q86YI8 300 aaPredicted RBP18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 CRLF3Q8IUI8 442 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 METTL25Q8N6Q8 603 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 SIRPGQ9P1W8 387 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 DDX39AO00148 427 aaKnown RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 CSDE1O75534 798 aaKnown RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 SORBS2O94875 1100 aaKnown RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 CLPTM1O96005 669 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 CDKN2BP42772 138 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 EPHB1P54762 984 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 ADARP55265 1226 aaKnown RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PEX3P56589 373 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PSMC5P62195 406 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 LRRC38Q5VT99 294 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 ICA1LQ8NDH6 482 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 EBF4Q9BQW3 602 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 XPO7Q9UIA9 1087 aaKnown RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PLLPQ9Y342 182 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 CCDC160A6NGH7 325 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 SDR42E2A6NKP2 422 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 WDR46O15213 610 aaKnown RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PEX1O43933 1283 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PDE5AO76074 875 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 RAG1P15918 1043 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 ZNF252P-AS1Q0IIN9 211 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 SNAPC2Q13487 334 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 CYLC2Q14093 348 aaPredicted RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 TLR1Q15399 786 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 TRIM72Q6ZMU5 477 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 MARVELD2Q8N4S9 558 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 ZNF526Q8TF50 670 aaPredicted RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 TMEM165Q9HC07 324 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PARVAQ9NVD7 372 aa18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 SAE1Q9UBE0 346 aaPredicted RBP18.37■□□□□ 0.53
CDKN1B-201ENST00000228872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 TRIM49D1C9J1S8 452 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 ZC3H11AO75152 810 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 FDFT1P37268 417 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 ELK3P41970 407 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 RARRES1P49788 294 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 CYP24A1Q07973 514 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 GRAMD1BQ3KR37 738 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 DUS1LQ6P1R4 473 aaKnown RBP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 PGM2L1Q6PCE3 622 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 ABRAQ8N0Z2 381 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 GAB3Q8WWW8 586 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 ABTB1Q969K4 478 aaPredicted RBP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 GCNAQ96QF7 691 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 TIMMDC1Q9NPL8 285 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 GPRC5CQ9NQ84 441 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 STRNO43815 780 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 EMP3P54852 163 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 NCKAP1LP55160 1127 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 SUPT20HL1Q3ZLR7 823 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 USP6NLQ92738 828 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 C20orf27Q9GZN8 174 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 SORCS3Q9UPU3 1222 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 TMEM191CA6NGB0 347 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 TTLL13PA6NNM8 815 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 KBTBD13C9JR72 458 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 SNNO75324 88 aaPredicted RBP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 FAM155BO75949 473 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 TMEM191BP0C7N4 346 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 POLR2MP0CAP2 368 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 SERPINB6P35237 376 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 PPP1R14BQ96C90 147 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 CCDC124Q96CT7 223 aaKnown RBP18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 WRNIP1Q96S55 665 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 SH2D3AQ9BRG2 576 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 AS3MTQ9HBK9 375 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 EXOC7Q9UPT5 735 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 DTNAQ9Y4J8 743 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 MAD1L1Q9Y6D9 718 aa18.36■□□□□ 0.53
CDKN1B-201ENST00000228872 SF3B1O75533 1304 aaKnown RBP eCLIP18.36■□□□□ 0.535e-6■■■■■ 39
CDKN1B-201ENST00000228872 CAPN8A6NHC0 703 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 F8VP50 259 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 CYB561D2O14569 222 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 GALK1P51570 392 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 DYNLT1P63172 113 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 IRX4P78413 519 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 MRPS5P82675 430 aaKnown RBP18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 BTKQ06187 659 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 WASHC5Q12768 1159 aa18.35■□□□□ 0.53
CDKN1B-201ENST00000228872 MYLK3Q32MK0 819 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms