RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CCDC97Q96F63 343 aaPredicted RBP7.21□□□□□ -1.25
RFX3-212ENST00000617270 EZRP15311 586 aaKnown RBP7.21□□□□□ -1.25
RFX3-212ENST00000617270 FAM193AP78312 1265 aa7.21□□□□□ -1.25
RFX3-212ENST00000617270 RBM10P98175 930 aaKnown RBP7.21□□□□□ -1.25
RFX3-212ENST00000617270 RRP1P56182 461 aaKnown RBP7.21□□□□□ -1.25
RFX3-212ENST00000617270 ERLIN2O94905 339 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 ANKRD18AQ8IVF6 992 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 MAGEC2Q9UBF1 373 aaPredicted RBP7.21□□□□□ -1.26
RFX3-212ENST00000617270 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 FHAD1B1AJZ9 1412 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 WWC2Q6AWC2 1192 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 SMARCE1Q969G3 411 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 TRAK1Q9UPV9 953 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 TNIKQ9UKE5 1360 aa7.21□□□□□ -1.26
RFX3-212ENST00000617270 INTS3Q68E01 1043 aaKnown RBP7.2□□□□□ -1.26
RFX3-212ENST00000617270 DYDC1Q8WWB3 177 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 NUCB2P80303 420 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 PDCL3Q9H2J4 239 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 DDX19BQ9UMR2 479 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 XBP1P17861 261 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 E9PSI1 815 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 CCAR1Q8IX12 1150 aaKnown RBP7.2□□□□□ -1.26
RFX3-212ENST00000617270 MEX3CQ5U5Q3 659 aaKnown RBP7.2□□□□□ -1.26
RFX3-212ENST00000617270 PKNOX2Q96KN3 472 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 MYBBP1AQ9BQG0 1328 aaKnown RBP7.2□□□□□ -1.26
RFX3-212ENST00000617270 KIF15Q9NS87 1388 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 ERC2O15083 957 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 KINO60870 393 aaKnown RBP7.2□□□□□ -1.26
RFX3-212ENST00000617270 INCENPQ9NQS7 918 aa7.2□□□□□ -1.26
RFX3-212ENST00000617270 SPC24Q8NBT2 197 aa7.19□□□□□ -1.26
RFX3-212ENST00000617270 MPHOSPH9Q99550 1183 aa7.19□□□□□ -1.26
RFX3-212ENST00000617270 KIF3BO15066 747 aa7.19□□□□□ -1.26
RFX3-212ENST00000617270 CAVIN1Q6NZI2 390 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 CEBPZQ03701 1054 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 MTERF4Q7Z6M4 381 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 DDX58O95786 925 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 CLASRPQ8N2M8 674 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 CCP110O43303 1012 aa7.19□□□□□ -1.26
RFX3-212ENST00000617270 CCDC181Q5TID7 509 aa7.19□□□□□ -1.26
RFX3-212ENST00000617270 DZIP1LQ8IYY4 767 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 SEPT11Q9NVA2 429 aaKnown RBP7.19□□□□□ -1.26
RFX3-212ENST00000617270 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
RFX3-212ENST00000617270 FILIP1LQ4L180 1135 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 TAF3Q5VWG9 929 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 PANK3Q9H999 370 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 FSD1Q9BTV5 496 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 C22orf23Q9BZE7 217 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 DEF6Q9H4E7 631 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 LNPKQ9C0E8 428 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 ROCK1Q13464 1354 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 AIMP1Q12904 312 aaKnown RBP7.18□□□□□ -1.26
RFX3-212ENST00000617270 IBSPP21815 317 aaPredicted RBP7.18□□□□□ -1.26
RFX3-212ENST00000617270 FAM177A1Q8N128 213 aaPredicted RBP7.18□□□□□ -1.26
RFX3-212ENST00000617270 MPNDQ8N594 471 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 ZNHIT6Q9NWK9 470 aaKnown RBP7.18□□□□□ -1.26
RFX3-212ENST00000617270 WASHC2CQ9Y4E1 1318 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
RFX3-212ENST00000617270 TANGO6Q9C0B7 1094 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 TSPY26PQ9H489 355 aa7.18□□□□□ -1.26
RFX3-212ENST00000617270 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.17□□□□□ -1.261e-9■■■■□ 20.1
RFX3-212ENST00000617270 TXLNAP40222 546 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 ZHX3Q9H4I2 956 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 ERICH4A6NGS2 130 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 FIBPO43427 364 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 MRE11P49959 708 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 DNAJC2Q99543 621 aaKnown RBP7.17□□□□□ -1.26
RFX3-212ENST00000617270 SERPINC1P01008 464 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 API5Q9BZZ5 524 aaKnown RBP7.17□□□□□ -1.26
RFX3-212ENST00000617270 ANKRD30AQ9BXX3 1397 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 NEBLO76041 1014 aa7.17□□□□□ -1.26
RFX3-212ENST00000617270 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.17□□□□□ -1.26
RFX3-212ENST00000617270 NINLQ9Y2I6 1382 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 CCDC112Q8NEF3 446 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 STK38Q15208 465 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 GBP2P32456 591 aaPredicted RBP7.16□□□□□ -1.26
RFX3-212ENST00000617270 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 CDC45O75419 566 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 PSMA5P28066 241 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 RIPK4P57078 832 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 ATP2B2Q01814 1243 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 APAF1O14727 1248 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 PIP4K2AP48426 406 aaPredicted RBP7.16□□□□□ -1.26
RFX3-212ENST00000617270 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 HSP90AB4PQ58FF6 505 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 BRPF3Q9ULD4 1205 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 ERLIN1O75477 346 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 HMGN5P82970 282 aaKnown RBP7.16□□□□□ -1.26
RFX3-212ENST00000617270 PPFIBP1Q86W92 1011 aa7.16□□□□□ -1.26
RFX3-212ENST00000617270 MINK1Q8N4C8 1332 aaPredicted RBP7.15□□□□□ -1.26
RFX3-212ENST00000617270 FAM177BA6PVY3 158 aa7.15□□□□□ -1.26
RFX3-212ENST00000617270 GIMAP7Q8NHV1 300 aa7.15□□□□□ -1.26
RFX3-212ENST00000617270 CCDC102AQ96A19 550 aa7.15□□□□□ -1.26
RFX3-212ENST00000617270 PRPF40AO75400 957 aaKnown RBP7.15□□□□□ -1.26
RFX3-212ENST00000617270 PPM1FP49593 454 aaPredicted RBP7.15□□□□□ -1.26
RFX3-212ENST00000617270 RIC3Q7Z5B4 369 aa7.15□□□□□ -1.26
RFX3-212ENST00000617270 LRRFIP2Q9Y608 721 aaKnown RBP7.15□□□□□ -1.26
RFX3-212ENST00000617270 NF2P35240 595 aa7.15□□□□□ -1.27
RFX3-212ENST00000617270 RABEP1Q15276 862 aa7.15□□□□□ -1.27
RFX3-212ENST00000617270 TSPYL4Q9UJ04 414 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms