RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
CHD1-212ENST00000614616 NAP1L1P55209 391 aaKnown RBP16.47■□□□□ 0.23
CHD1-212ENST00000614616 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
CHD1-212ENST00000614616 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
CHD1-212ENST00000614616 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
CHD1-212ENST00000614616 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
CHD1-212ENST00000614616 SLC4A10Q6U841 1118 aa16.46■□□□□ 0.23
CHD1-212ENST00000614616 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
CHD1-212ENST00000614616 PKD2Q13563 968 aa16.46■□□□□ 0.23
CHD1-212ENST00000614616 TXLNBQ8N3L3 684 aa16.46■□□□□ 0.23
CHD1-212ENST00000614616 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
CHD1-212ENST00000614616 PDCP20941 246 aa16.45■□□□□ 0.22
CHD1-212ENST00000614616 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
CHD1-212ENST00000614616 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
CHD1-212ENST00000614616 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
CHD1-212ENST00000614616 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
CHD1-212ENST00000614616 RSPH4AQ5TD94 716 aa16.44■□□□□ 0.22
CHD1-212ENST00000614616 A0A0G2JS52 829 aa16.44■□□□□ 0.22
CHD1-212ENST00000614616 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
CHD1-212ENST00000614616 KIF18AQ8NI77 898 aa16.44■□□□□ 0.22
CHD1-212ENST00000614616 ERLIN2O94905 339 aa16.44■□□□□ 0.22
CHD1-212ENST00000614616 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
CHD1-212ENST00000614616 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
CHD1-212ENST00000614616 CCDC94Q9BW85 323 aaPredicted RBP16.43■□□□□ 0.22
CHD1-212ENST00000614616 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
CHD1-212ENST00000614616 MCM3P25205 808 aa16.43■□□□□ 0.22
CHD1-212ENST00000614616 UBXN4Q92575 508 aa16.43■□□□□ 0.22
CHD1-212ENST00000614616 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
CHD1-212ENST00000614616 CUX1P39880 1505 aa16.43■□□□□ 0.22
CHD1-212ENST00000614616 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
CHD1-212ENST00000614616 C11orf95C9JLR9 678 aaPredicted RBP16.43■□□□□ 0.22
CHD1-212ENST00000614616 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
CHD1-212ENST00000614616 MICALCLQ6ZW33 695 aa16.42■□□□□ 0.22
CHD1-212ENST00000614616 MAP9Q49MG5 647 aa16.42■□□□□ 0.22
CHD1-212ENST00000614616 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
CHD1-212ENST00000614616 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
CHD1-212ENST00000614616 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHD1-212ENST00000614616 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
CHD1-212ENST00000614616 IVLP07476 585 aa16.4■□□□□ 0.22
CHD1-212ENST00000614616 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
CHD1-212ENST00000614616 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
CHD1-212ENST00000614616 TNMDQ9H2S6 317 aa16.4■□□□□ 0.22
CHD1-212ENST00000614616 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
CHD1-212ENST00000614616 IPO4Q8TEX9 1081 aaKnown RBP16.4■□□□□ 0.22
CHD1-212ENST00000614616 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
CHD1-212ENST00000614616 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 FILIP1Q7Z7B0 1213 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
CHD1-212ENST00000614616 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
CHD1-212ENST00000614616 FILIP1LQ4L180 1135 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 KIF20AO95235 890 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 PANK3Q9H999 370 aa16.39■□□□□ 0.21
CHD1-212ENST00000614616 PAXBP1Q9Y5B6 917 aa16.38■□□□□ 0.21
CHD1-212ENST00000614616 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
CHD1-212ENST00000614616 LUZP1Q86V48 1076 aa16.38■□□□□ 0.21
CHD1-212ENST00000614616 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
CHD1-212ENST00000614616 CT47A1Q5JQC4 288 aaPredicted RBP16.38■□□□□ 0.21
CHD1-212ENST00000614616 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
CHD1-212ENST00000614616 PSMA5P28066 241 aa16.38■□□□□ 0.21
CHD1-212ENST00000614616 KIF21BO75037 1637 aa16.37■□□□□ 0.21
CHD1-212ENST00000614616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.37■□□□□ 0.21
CHD1-212ENST00000614616 CCDC91Q7Z6B0 441 aa16.37■□□□□ 0.21
CHD1-212ENST00000614616 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
CHD1-212ENST00000614616 SYCE3A1L190 88 aa16.37■□□□□ 0.21
CHD1-212ENST00000614616 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
CHD1-212ENST00000614616 MNAT1P51948 309 aa16.37■□□□□ 0.21
CHD1-212ENST00000614616 CCDC27Q2M243 656 aa16.36■□□□□ 0.21
CHD1-212ENST00000614616 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
CHD1-212ENST00000614616 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.218e-7■■■■■ 35.9
CHD1-212ENST00000614616 NUP155O75694 1391 aa16.36■□□□□ 0.21
CHD1-212ENST00000614616 CPLX1O14810 134 aa16.36■□□□□ 0.21
CHD1-212ENST00000614616 CRACR2AQ9BSW2 395 aa16.36■□□□□ 0.21
CHD1-212ENST00000614616 GOLGA6L10A0A0M3HER8 536 aa16.35■□□□□ 0.21
CHD1-212ENST00000614616 NF2P35240 595 aa16.35■□□□□ 0.21
CHD1-212ENST00000614616 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
CHD1-212ENST00000614616 PRM3Q9NNZ6 103 aa16.35■□□□□ 0.21
CHD1-212ENST00000614616 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
CHD1-212ENST00000614616 BMS1Q14692 1282 aaKnown RBP16.34■□□□□ 0.21
CHD1-212ENST00000614616 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
CHD1-212ENST00000614616 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
CHD1-212ENST00000614616 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
CHD1-212ENST00000614616 CASQ1P31415 396 aa16.34■□□□□ 0.21
CHD1-212ENST00000614616 SERPINC1P01008 464 aa16.33■□□□□ 0.21
CHD1-212ENST00000614616 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
CHD1-212ENST00000614616 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.2
CHD1-212ENST00000614616 FIBPO43427 364 aa16.33■□□□□ 0.2
CHD1-212ENST00000614616 TNNT1P13805 278 aa16.33■□□□□ 0.2
CHD1-212ENST00000614616 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
CHD1-212ENST00000614616 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
CHD1-212ENST00000614616 TERF2IPQ9NYB0 399 aa16.33■□□□□ 0.2
CHD1-212ENST00000614616 EPS15P42566 896 aa16.33■□□□□ 0.2
CHD1-212ENST00000614616 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.2
CHD1-212ENST00000614616 FAM193AP78312 1265 aa16.32■□□□□ 0.2
CHD1-212ENST00000614616 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
CHD1-212ENST00000614616 TDO2P48775 406 aa16.32■□□□□ 0.2
CHD1-212ENST00000614616 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
CHD1-212ENST00000614616 CCDC183Q5T5S1 534 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms