RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 PRR12Q9ULL5 1215 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 TXNDC2Q86VQ3 553 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 TMEM87AQ8NBN3 555 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 PRMT3O60678 531 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 MAP3K7O43318 606 aa6.92□□□□□ -1.3
BRIP1-202ENST00000577598 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
BRIP1-202ENST00000577598 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
BRIP1-202ENST00000577598 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
BRIP1-202ENST00000577598 SMAD5Q99717 465 aaKnown RBP6.92□□□□□ -1.3
BRIP1-202ENST00000577598 CDHR5Q9HBB8 845 aa6.92□□□□□ -1.3
BRIP1-202ENST00000577598 PLEKHD1A6NEE1 506 aa6.92□□□□□ -1.3
BRIP1-202ENST00000577598 NPHP1O15259 732 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 RALBP1Q15311 655 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 ZFYVE27Q5T4F4 411 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 TBC1D9Q6ZT07 1266 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
BRIP1-202ENST00000577598 TBC1D12O60347 775 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 C21orf62-AS1Q17RA5 79 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 SH3D19Q5HYK7 790 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 PIF1Q9H611 641 aa6.91□□□□□ -1.3
BRIP1-202ENST00000577598 ATP2B1P20020 1258 aa6.9□□□□□ -1.3
BRIP1-202ENST00000577598 NLRP6P59044 892 aa6.9□□□□□ -1.3
BRIP1-202ENST00000577598 SPTY2D1Q68D10 685 aaPredicted RBP6.9□□□□□ -1.3
BRIP1-202ENST00000577598 CREBRFQ8IUR6 639 aa6.9□□□□□ -1.3
BRIP1-202ENST00000577598 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.3
BRIP1-202ENST00000577598 MRS2Q9HD23 443 aa6.9□□□□□ -1.3
BRIP1-202ENST00000577598 FARP1Q9Y4F1 1045 aaPredicted RBP6.9□□□□□ -1.3
BRIP1-202ENST00000577598 PIK3CDO00329 1044 aa6.9□□□□□ -1.31
BRIP1-202ENST00000577598 GLYCTKQ8IVS8 523 aa6.9□□□□□ -1.31
BRIP1-202ENST00000577598 TBC1D2Q9BYX2 928 aa6.9□□□□□ -1.31
BRIP1-202ENST00000577598 GPR37O15354 613 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 TMTC2Q8N394 836 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 EPS8L1Q8TE68 723 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 S100BP04271 92 aaPredicted RBP6.89□□□□□ -1.31
BRIP1-202ENST00000577598 HIC1Q14526 733 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 AMHR2Q16671 573 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 ACBD3Q9H3P7 528 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 CCDC189A1A4V9 331 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 CREB3O43889 395 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 BIRC2Q13490 618 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 TSR2Q969E8 191 aaKnown RBP6.89□□□□□ -1.31
BRIP1-202ENST00000577598 PRIMPOLQ96LW4 560 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 MRVI1Q9Y6F6 885 aa6.89□□□□□ -1.31
BRIP1-202ENST00000577598 RECKO95980 971 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 RBM46Q8TBY0 533 aaKnown RBP6.88□□□□□ -1.31
BRIP1-202ENST00000577598 PMM1Q92871 262 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 CCSER2Q9H7U1 834 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 PSME1Q06323 249 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 PTPROQ16827 1216 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 VPS37AQ8NEZ2 397 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 SGSM3Q96HU1 749 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 HOXA2O43364 376 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 DSG2Q14126 1118 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 PCDHB15Q9Y5E8 787 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 CADPSQ9ULU8 1353 aa6.88□□□□□ -1.31
BRIP1-202ENST00000577598 RBM47A0AV96 593 aaKnown RBP6.87□□□□□ -1.31
BRIP1-202ENST00000577598 USP17L8P0C7I0 530 aa6.87□□□□□ -1.31
BRIP1-202ENST00000577598 PRPF38AQ8NAV1 312 aaKnown RBP6.87□□□□□ -1.31
BRIP1-202ENST00000577598 PRM3Q9NNZ6 103 aa6.87□□□□□ -1.31
BRIP1-202ENST00000577598 NDUFV2P19404 249 aa6.87□□□□□ -1.31
BRIP1-202ENST00000577598 CLCN1P35523 988 aa6.87□□□□□ -1.31
BRIP1-202ENST00000577598 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
BRIP1-202ENST00000577598 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
BRIP1-202ENST00000577598 FMNL3Q8IVF7 1028 aa6.87□□□□□ -1.31
BRIP1-202ENST00000577598 LRRN4Q8WUT4 740 aa6.86□□□□□ -1.31
BRIP1-202ENST00000577598 ANO8Q9HCE9 1232 aaPredicted RBP6.86□□□□□ -1.31
BRIP1-202ENST00000577598 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
BRIP1-202ENST00000577598 CCAR1Q8IX12 1150 aaKnown RBP6.86□□□□□ -1.31
BRIP1-202ENST00000577598 UCN2Q96RP3 112 aa6.86□□□□□ -1.31
BRIP1-202ENST00000577598 FCHSD2O94868 740 aa6.86□□□□□ -1.31
BRIP1-202ENST00000577598 NAA30Q147X3 362 aaPredicted RBP6.86□□□□□ -1.31
BRIP1-202ENST00000577598 NEUROD4Q9HD90 331 aa6.86□□□□□ -1.31
BRIP1-202ENST00000577598 USTQ9Y2C2 406 aa6.86□□□□□ -1.31
BRIP1-202ENST00000577598 ZBTB12Q9Y330 459 aaPredicted RBP6.86□□□□□ -1.31
BRIP1-202ENST00000577598 PDE3BQ13370 1112 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 TERF2IPQ9NYB0 399 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 TCEAL9Q9UHQ7 104 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 DDX11L8A8MPP1 907 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 GUCA2AQ02747 115 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 SEMA3FQ13275 785 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 PRR7Q8TB68 274 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 HLA-CQ95604 372 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 VTI1BQ9UEU0 232 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 SSUH2Q9Y2M2 353 aa6.85□□□□□ -1.31
BRIP1-202ENST00000577598 SLC4A8Q2Y0W8 1093 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 BRD3Q15059 726 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 TCEAL1Q15170 157 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 CCER2I3L3R5 266 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 NEFMP07197 916 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 PPP1R18Q6NYC8 613 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 PPCSQ9HAB8 311 aa6.84□□□□□ -1.31
BRIP1-202ENST00000577598 NOVA2Q9UNW9 492 aaKnown RBP6.84□□□□□ -1.31
BRIP1-202ENST00000577598 RASA1P20936 1047 aa6.84□□□□□ -1.32
BRIP1-202ENST00000577598 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.32
BRIP1-202ENST00000577598 UBR7Q8N806 425 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms