RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
TRIO-218ENST00000512070 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
TRIO-218ENST00000512070 NAP1L1P55209 391 aaKnown RBP17.41■□□□□ 0.38
TRIO-218ENST00000512070 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
TRIO-218ENST00000512070 LEKR1Q6ZMV7 388 aa17.41■□□□□ 0.38
TRIO-218ENST00000512070 KIF3BO15066 747 aa17.41■□□□□ 0.38
TRIO-218ENST00000512070 APPP05067 770 aa17.4■□□□□ 0.38
TRIO-218ENST00000512070 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
TRIO-218ENST00000512070 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
TRIO-218ENST00000512070 SART3Q15020 963 aaKnown RBP17.4■□□□□ 0.38
TRIO-218ENST00000512070 FOXD1Q16676 465 aa17.39■□□□□ 0.37
TRIO-218ENST00000512070 GOLGA6L10A6NI86 522 aa17.39■□□□□ 0.37
TRIO-218ENST00000512070 TXLNAP40222 546 aa17.39■□□□□ 0.37
TRIO-218ENST00000512070 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
TRIO-218ENST00000512070 FILIP1LQ4L180 1135 aa17.38■□□□□ 0.37
TRIO-218ENST00000512070 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
TRIO-218ENST00000512070 IQCEQ6IPM2 695 aa17.38■□□□□ 0.37
TRIO-218ENST00000512070 USP8P40818 1118 aa17.38■□□□□ 0.37
TRIO-218ENST00000512070 TAF3Q5VWG9 929 aa17.38■□□□□ 0.37
TRIO-218ENST00000512070 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
TRIO-218ENST00000512070 GNAI1P63096 354 aa17.37■□□□□ 0.37
TRIO-218ENST00000512070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.37■□□□□ 0.378e-7■■■□□ 16
TRIO-218ENST00000512070 CCDC9Q9Y3X0 531 aaKnown RBP17.37■□□□□ 0.37
TRIO-218ENST00000512070 PANK3Q9H999 370 aa17.37■□□□□ 0.37
TRIO-218ENST00000512070 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
TRIO-218ENST00000512070 RABEP1Q15276 862 aa17.36■□□□□ 0.37
TRIO-218ENST00000512070 C22orf23Q9BZE7 217 aa17.36■□□□□ 0.37
TRIO-218ENST00000512070 INCENPQ9NQS7 918 aa17.36■□□□□ 0.37
TRIO-218ENST00000512070 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
TRIO-218ENST00000512070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.35■□□□□ 0.372e-6■■■■■ 149.1
TRIO-218ENST00000512070 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
TRIO-218ENST00000512070 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
TRIO-218ENST00000512070 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
TRIO-218ENST00000512070 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
TRIO-218ENST00000512070 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
TRIO-218ENST00000512070 CDC45O75419 566 aa17.34■□□□□ 0.37
TRIO-218ENST00000512070 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
TRIO-218ENST00000512070 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
TRIO-218ENST00000512070 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
TRIO-218ENST00000512070 CRBNQ96SW2 442 aa17.34■□□□□ 0.37
TRIO-218ENST00000512070 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.37
TRIO-218ENST00000512070 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.37
TRIO-218ENST00000512070 ZNHIT6Q9NWK9 470 aaKnown RBP17.33■□□□□ 0.37
TRIO-218ENST00000512070 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.36
TRIO-218ENST00000512070 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.36
TRIO-218ENST00000512070 DACH1Q9UI36 760 aa17.32■□□□□ 0.36
TRIO-218ENST00000512070 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
TRIO-218ENST00000512070 KIAA0754O94854 1291 aa17.31■□□□□ 0.36
TRIO-218ENST00000512070 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
TRIO-218ENST00000512070 ERLIN1O75477 346 aa17.31■□□□□ 0.36
TRIO-218ENST00000512070 ANKRD1Q15327 319 aa17.31■□□□□ 0.36
TRIO-218ENST00000512070 CWC22Q9HCG8 908 aaKnown RBP17.31■□□□□ 0.36
TRIO-218ENST00000512070 KANK4Q5T7N3 995 aaPredicted RBP17.3■□□□□ 0.36
TRIO-218ENST00000512070 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
TRIO-218ENST00000512070 STIM1Q13586 685 aa17.3■□□□□ 0.36
TRIO-218ENST00000512070 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
TRIO-218ENST00000512070 EVA1CP58658 441 aa17.3■□□□□ 0.36
TRIO-218ENST00000512070 SYCP1Q15431 976 aa17.3■□□□□ 0.36
TRIO-218ENST00000512070 RRBP1Q9P2E9 1410 aaKnown RBP17.3■□□□□ 0.36
TRIO-218ENST00000512070 MYOM3Q5VTT5 1437 aa17.29■□□□□ 0.36
TRIO-218ENST00000512070 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
TRIO-218ENST00000512070 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
TRIO-218ENST00000512070 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
TRIO-218ENST00000512070 TRIM5Q9C035 493 aa17.29■□□□□ 0.36
TRIO-218ENST00000512070 ERC1Q8IUD2 1116 aa17.29■□□□□ 0.36
TRIO-218ENST00000512070 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
TRIO-218ENST00000512070 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
TRIO-218ENST00000512070 CCDC7Q96M83 1385 aa17.29■□□□□ 0.36
TRIO-218ENST00000512070 EZRP15311 586 aaKnown RBP17.28■□□□□ 0.36
TRIO-218ENST00000512070 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
TRIO-218ENST00000512070 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.35
TRIO-218ENST00000512070 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
TRIO-218ENST00000512070 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.35
TRIO-218ENST00000512070 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.35
TRIO-218ENST00000512070 CCDC192P0DO97 292 aa17.26■□□□□ 0.35
TRIO-218ENST00000512070 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
TRIO-218ENST00000512070 GNAI3P08754 354 aa17.26■□□□□ 0.35
TRIO-218ENST00000512070 RIPK4P57078 832 aa17.26■□□□□ 0.35
TRIO-218ENST00000512070 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
TRIO-218ENST00000512070 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
TRIO-218ENST00000512070 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
TRIO-218ENST00000512070 TRAK1Q9UPV9 953 aa17.25■□□□□ 0.35
TRIO-218ENST00000512070 PDCL2Q8N4E4 241 aa17.25■□□□□ 0.35
TRIO-218ENST00000512070 DHX57Q6P158 1386 aaKnown RBP17.25■□□□□ 0.35
TRIO-218ENST00000512070 SEPT7Q16181 437 aaKnown RBP17.25■□□□□ 0.35
TRIO-218ENST00000512070 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
TRIO-218ENST00000512070 PDILTQ8N807 584 aa17.25■□□□□ 0.35
TRIO-218ENST00000512070 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
TRIO-218ENST00000512070 CBFA2T2O43439 604 aa17.24■□□□□ 0.35
TRIO-218ENST00000512070 TSPYL1Q9H0U9 437 aa17.24■□□□□ 0.35
TRIO-218ENST00000512070 AXDND1Q5T1B0 1012 aaPredicted RBP17.24■□□□□ 0.35
TRIO-218ENST00000512070 KIF2AO00139 706 aaPredicted RBP17.24■□□□□ 0.35
TRIO-218ENST00000512070 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
TRIO-218ENST00000512070 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
TRIO-218ENST00000512070 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
TRIO-218ENST00000512070 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
TRIO-218ENST00000512070 DESP17661 470 aa17.23■□□□□ 0.35
TRIO-218ENST00000512070 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
TRIO-218ENST00000512070 KIF21BO75037 1637 aa17.23■□□□□ 0.35
TRIO-218ENST00000512070 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms