RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 AATKQ6ZMQ8 1374 aa4.34□□□□□ -1.72
NEDD4-204ENST00000503468 NWD2Q9ULI1 1742 aa4.34□□□□□ -1.72
NEDD4-204ENST00000503468 NSD2O96028 1365 aa4.33□□□□□ -1.72
NEDD4-204ENST00000503468 NUP155O75694 1391 aa4.32□□□□□ -1.72
NEDD4-204ENST00000503468 NRAPQ86VF7 1730 aa4.32□□□□□ -1.72
NEDD4-204ENST00000503468 HEG1Q9ULI3 1381 aa4.32□□□□□ -1.72
NEDD4-204ENST00000503468 MAP2P11137 1827 aaKnown RBP4.32□□□□□ -1.72
NEDD4-204ENST00000503468 OVOS2A0A0J9YW53 1432 aa4.32□□□□□ -1.72
NEDD4-204ENST00000503468 OVOS2Q6IE36 1432 aa4.32□□□□□ -1.72
NEDD4-204ENST00000503468 KDM6AO15550 1401 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-204ENST00000503468 PLPPR3Q6T4P5 718 aa4.32□□□□□ -1.72
NEDD4-204ENST00000503468 PLEKHG1Q9ULL1 1385 aa4.3□□□□□ -1.72
NEDD4-204ENST00000503468 C5P01031 1676 aa4.3□□□□□ -1.72
NEDD4-204ENST00000503468 DNAJC5Q9H3Z4 198 aa4.3□□□□□ -1.72
NEDD4-204ENST00000503468 KDM3BQ7LBC6 1761 aa4.3□□□□□ -1.72
NEDD4-204ENST00000503468 TRMT2AQ8IZ69 625 aaKnown RBP4.3□□□□□ -1.72
NEDD4-204ENST00000503468 YTHDC2Q9H6S0 1430 aaKnown RBP4.29□□□□□ -1.72
NEDD4-204ENST00000503468 ROCK2O75116 1388 aaKnown RBP4.29□□□□□ -1.72
NEDD4-204ENST00000503468 KIF15Q9NS87 1388 aa4.29□□□□□ -1.72
NEDD4-204ENST00000503468 PPP1R15AO75807 674 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-204ENST00000503468 KIAA1551Q9HCM1 1747 aa4.29□□□□□ -1.72
NEDD4-204ENST00000503468 AFDNP55196 1824 aaKnown RBP4.29□□□□□ -1.72
NEDD4-204ENST00000503468 PXDNLA1KZ92 1463 aa4.29□□□□□ -1.72
NEDD4-204ENST00000503468 ROBO1Q9Y6N7 1651 aa4.29□□□□□ -1.72
NEDD4-204ENST00000503468 BRPF1P55201 1214 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-204ENST00000503468 COL15A1P39059 1388 aa4.28□□□□□ -1.72
NEDD4-204ENST00000503468 CCDC7Q96M83 1385 aa4.28□□□□□ -1.72
NEDD4-204ENST00000503468 RGL2O15211 777 aa4.28□□□□□ -1.72
NEDD4-204ENST00000503468 TRIM26Q12899 539 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-204ENST00000503468 CENPBP07199 599 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-204ENST00000503468 THSD7AQ9UPZ6 1657 aa4.27□□□□□ -1.73
NEDD4-204ENST00000503468 NGEFQ8N5V2 710 aa4.27□□□□□ -1.73
NEDD4-204ENST00000503468 RGS12O14924 1447 aa4.27□□□□□ -1.73
NEDD4-204ENST00000503468 NRXN2Q9P2S2 1712 aa4.26□□□□□ -1.73
NEDD4-204ENST00000503468 LTBP1Q14766 1721 aa4.26□□□□□ -1.73
NEDD4-204ENST00000503468 VIRMAQ69YN4 1812 aaKnown RBP4.26□□□□□ -1.73
NEDD4-204ENST00000503468 ANKRD36BQ8N2N9 1353 aa4.26□□□□□ -1.73
NEDD4-204ENST00000503468 KIF20BQ96Q89 1820 aa4.25□□□□□ -1.73
NEDD4-204ENST00000503468 RIC1Q4ADV7 1423 aa4.25□□□□□ -1.73
NEDD4-204ENST00000503468 SCN7AQ01118 1682 aa4.25□□□□□ -1.73
NEDD4-204ENST00000503468 BCL9LQ86UU0 1499 aa4.25□□□□□ -1.73
NEDD4-204ENST00000503468 ERICH6Q7L0X2 663 aa4.25□□□□□ -1.73
NEDD4-204ENST00000503468 PXDNQ92626 1479 aa4.24□□□□□ -1.73
NEDD4-204ENST00000503468 ZNF609O15014 1411 aa4.23□□□□□ -1.73
NEDD4-204ENST00000503468 NHSQ6T4R5 1651 aa4.23□□□□□ -1.73
NEDD4-204ENST00000503468 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
NEDD4-204ENST00000503468 TONSLQ96HA7 1378 aa4.22□□□□□ -1.73
NEDD4-204ENST00000503468 COL16A1Q07092 1604 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-204ENST00000503468 CPDO75976 1380 aa4.22□□□□□ -1.73
NEDD4-204ENST00000503468 PHLPP1O60346 1717 aa4.22□□□□□ -1.73
NEDD4-204ENST00000503468 LAMB2P55268 1798 aa4.21□□□□□ -1.73
NEDD4-204ENST00000503468 TMEM2Q9UHN6 1383 aa4.21□□□□□ -1.73
NEDD4-204ENST00000503468 SBNO1A3KN83 1393 aa4.21□□□□□ -1.74
NEDD4-204ENST00000503468 OSCARQ8IYS5 282 aa4.21□□□□□ -1.74
NEDD4-204ENST00000503468 DISP2A7MBM2 1401 aa4.21□□□□□ -1.74
NEDD4-204ENST00000503468 RTL1A6NKG5 1358 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 USP19O94966 1318 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 KIF13BQ9NQT8 1826 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 A0A1B0GUL6 1792 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 KLHL34Q8N239 644 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 LY75O60449 1722 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 TJP1Q07157 1748 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 LAMB4A4D0S4 1761 aa4.2□□□□□ -1.74
NEDD4-204ENST00000503468 C14orf93Q9H972 538 aaKnown RBP4.19□□□□□ -1.74
NEDD4-204ENST00000503468 TICAM2Q86XR7 235 aa4.19□□□□□ -1.74
NEDD4-204ENST00000503468 SCN11AQ9UI33 1791 aa4.19□□□□□ -1.74
NEDD4-204ENST00000503468 COL5A3P25940 1745 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-204ENST00000503468 SNED1Q8TER0 1413 aa4.18□□□□□ -1.74
NEDD4-204ENST00000503468 LRRC37AA6NMS7 1700 aa4.18□□□□□ -1.74
NEDD4-204ENST00000503468 PLEKHG3A1L390 1219 aa4.18□□□□□ -1.74
NEDD4-204ENST00000503468 CCER2I3L3R5 266 aa4.18□□□□□ -1.74
NEDD4-204ENST00000503468 TNS2Q63HR2 1409 aa4.18□□□□□ -1.74
NEDD4-204ENST00000503468 ARFGEF2Q9Y6D5 1785 aa4.18□□□□□ -1.74
NEDD4-204ENST00000503468 EFCAB2Q5VUJ9 269 aa4.17□□□□□ -1.74
NEDD4-204ENST00000503468 ERICH6BQ5W0A0 696 aa4.17□□□□□ -1.74
NEDD4-204ENST00000503468 PAPPA2Q9BXP8 1791 aa4.17□□□□□ -1.74
NEDD4-204ENST00000503468 CCDC27Q2M243 656 aa4.16□□□□□ -1.74
NEDD4-204ENST00000503468 TBX22Q9Y458 520 aa4.16□□□□□ -1.74
NEDD4-204ENST00000503468 CEMIPQ8WUJ3 1361 aa4.16□□□□□ -1.74
NEDD4-204ENST00000503468 PCGF6Q9BYE7 350 aa4.16□□□□□ -1.74
NEDD4-204ENST00000503468 PLEKHH1Q9ULM0 1364 aa4.16□□□□□ -1.74
NEDD4-204ENST00000503468 TIAM2Q8IVF5 1701 aa4.15□□□□□ -1.74
NEDD4-204ENST00000503468 IL27Q8NEV9 243 aa4.15□□□□□ -1.75
NEDD4-204ENST00000503468 C10orf71Q711Q0 1435 aa4.15□□□□□ -1.75
NEDD4-204ENST00000503468 CDK11AQ9UQ88 783 aaPredicted RBP4.15□□□□□ -1.75
NEDD4-204ENST00000503468 NUP188Q5SRE5 1749 aa4.15□□□□□ -1.75
NEDD4-204ENST00000503468 CCDC184Q52MB2 194 aa4.14□□□□□ -1.75
NEDD4-204ENST00000503468 MYT1LQ9UL68 1186 aa4.14□□□□□ -1.75
NEDD4-204ENST00000503468 SOS1Q07889 1333 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-204ENST00000503468 IGSF3O75054 1194 aa4.14□□□□□ -1.75
NEDD4-204ENST00000503468 AMER1Q5JTC6 1135 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-204ENST00000503468 ARXQ96QS3 562 aa4.13□□□□□ -1.75
NEDD4-204ENST00000503468 ARAP2Q8WZ64 1704 aa4.13□□□□□ -1.75
NEDD4-204ENST00000503468 AK9Q5TCS8 1911 aa4.13□□□□□ -1.75
NEDD4-204ENST00000503468 EIF3AQ14152 1382 aaKnown RBP4.13□□□□□ -1.75
NEDD4-204ENST00000503468 BCORQ6W2J9 1755 aa4.12□□□□□ -1.75
NEDD4-204ENST00000503468 DLG5Q8TDM6 1919 aa4.12□□□□□ -1.75
NEDD4-204ENST00000503468 TNRC6CQ9HCJ0 1690 aaKnown RBP4.11□□□□□ -1.75
NEDD4-204ENST00000503468 DLEC1Q9Y238 1755 aa4.11□□□□□ -1.75
NEDD4-204ENST00000503468 RGS22Q8NE09 1264 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms