RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NR1I2O75469 434 aa6.49□□□□□ -1.37
RIF1-212ENST00000498041 PLA2G2CQ5R387 149 aa6.49□□□□□ -1.37
RIF1-212ENST00000498041 KDM4AO75164 1064 aa6.48□□□□□ -1.37
RIF1-212ENST00000498041 NUTM1Q86Y26 1132 aa6.48□□□□□ -1.37
RIF1-212ENST00000498041 USP46P62068 366 aa6.47□□□□□ -1.37
RIF1-212ENST00000498041 FUT2Q10981 343 aa6.47□□□□□ -1.37
RIF1-212ENST00000498041 DIXDC1Q155Q3 683 aa6.47□□□□□ -1.37
RIF1-212ENST00000498041 GRIPAP1Q4V328 841 aa6.47□□□□□ -1.37
RIF1-212ENST00000498041 DDRGK1Q96HY6 314 aa6.47□□□□□ -1.37
RIF1-212ENST00000498041 GDF9O60383 454 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 ATP6V1AP38606 617 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 PRR20EP86478 221 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 PRR20CP86479 221 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 PRR20DP86480 221 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 PRR20BP86481 221 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 PRR20AP86496 221 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 SCUBE3Q8IX30 993 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 SPIRE2Q8WWL2 714 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 SPSB2Q99619 263 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 FAM117AQ9C073 453 aa6.46□□□□□ -1.38
RIF1-212ENST00000498041 TBC1D2Q9BYX2 928 aa6.44□□□□□ -1.38
RIF1-212ENST00000498041 AAASQ9NRG9 546 aa6.44□□□□□ -1.38
RIF1-212ENST00000498041 PLEKHG3A1L390 1219 aa6.43□□□□□ -1.38
RIF1-212ENST00000498041 HOXA2O43364 376 aa6.43□□□□□ -1.38
RIF1-212ENST00000498041 MORN1Q5T089 497 aa6.43□□□□□ -1.38
RIF1-212ENST00000498041 IL27Q8NEV9 243 aa6.43□□□□□ -1.38
RIF1-212ENST00000498041 RSPH6AQ9H0K4 717 aa6.43□□□□□ -1.38
RIF1-212ENST00000498041 DACH1Q9UI36 760 aa6.43□□□□□ -1.38
RIF1-212ENST00000498041 FCF1Q9Y324 198 aaKnown RBP6.42□□□□□ -1.38
RIF1-212ENST00000498041 MOXD2PA6NHM9 499 aa6.41□□□□□ -1.38
RIF1-212ENST00000498041 MYSM1Q5VVJ2 828 aa6.41□□□□□ -1.38
RIF1-212ENST00000498041 CYP4X1Q8N118 509 aa6.41□□□□□ -1.38
RIF1-212ENST00000498041 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
RIF1-212ENST00000498041 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
RIF1-212ENST00000498041 FDX1P10109 184 aa6.4□□□□□ -1.38
RIF1-212ENST00000498041 NDUFV2P19404 249 aa6.4□□□□□ -1.38
RIF1-212ENST00000498041 GJA5P36382 358 aa6.4□□□□□ -1.38
RIF1-212ENST00000498041 RIC3Q7Z5B4 369 aa6.4□□□□□ -1.38
RIF1-212ENST00000498041 TTC24A2A3L6 582 aaPredicted RBP6.39□□□□□ -1.39
RIF1-212ENST00000498041 C11orf95C9JLR9 678 aaPredicted RBP6.39□□□□□ -1.39
RIF1-212ENST00000498041 AXIN1O15169 862 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 SPTLC1O15269 473 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 CD2BP2O95400 341 aaKnown RBP6.39□□□□□ -1.39
RIF1-212ENST00000498041 GUCA2AQ02747 115 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 Q3C1V9 767 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 SH3D19Q5HYK7 790 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 RSBN1LQ6PCB5 846 aaPredicted RBP6.39□□□□□ -1.39
RIF1-212ENST00000498041 TREML4Q6UXN2 200 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 HLA-CQ95604 372 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 PRDM9Q9NQV7 894 aa6.39□□□□□ -1.39
RIF1-212ENST00000498041 GMPR2Q9P2T1 348 aaKnown RBP6.39□□□□□ -1.39
RIF1-212ENST00000498041 SALL2Q9Y467 1007 aaPredicted RBP6.39□□□□□ -1.39
RIF1-212ENST00000498041 ZBTB24O43167 697 aaPredicted RBP6.38□□□□□ -1.39
RIF1-212ENST00000498041 FMNL1O95466 1100 aaPredicted RBP6.38□□□□□ -1.39
RIF1-212ENST00000498041 SKIV2LQ15477 1246 aaKnown RBP6.38□□□□□ -1.39
RIF1-212ENST00000498041 GOPCQ9HD26 462 aa6.38□□□□□ -1.39
RIF1-212ENST00000498041 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
RIF1-212ENST00000498041 CLK2P49760 499 aaKnown RBP6.37□□□□□ -1.39
RIF1-212ENST00000498041 TUSC1Q2TAM9 212 aa6.37□□□□□ -1.39
RIF1-212ENST00000498041 BRICD5Q6PL45 260 aa6.37□□□□□ -1.39
RIF1-212ENST00000498041 THAP11Q96EK4 314 aa6.37□□□□□ -1.39
RIF1-212ENST00000498041 PCDHGC3Q9UN70 934 aa6.37□□□□□ -1.39
RIF1-212ENST00000498041 WFS1O76024 890 aa6.36□□□□□ -1.39
RIF1-212ENST00000498041 LIMD1Q9UGP4 676 aa6.36□□□□□ -1.39
RIF1-212ENST00000498041 C6orf229H3BNL8 230 aa6.35□□□□□ -1.39
RIF1-212ENST00000498041 RPIAP49247 311 aa6.35□□□□□ -1.39
RIF1-212ENST00000498041 PRPF38BQ5VTL8 546 aaKnown RBP6.35□□□□□ -1.39
RIF1-212ENST00000498041 RNF19BQ6ZMZ0 732 aa6.35□□□□□ -1.39
RIF1-212ENST00000498041 FAM160A2Q8N612 972 aaPredicted RBP6.35□□□□□ -1.39
RIF1-212ENST00000498041 PCMTD1Q96MG8 357 aaPredicted RBP6.35□□□□□ -1.39
RIF1-212ENST00000498041 ATP1B4Q9UN42 357 aaPredicted RBP6.35□□□□□ -1.39
RIF1-212ENST00000498041 PCDHB15Q9Y5E8 787 aa6.35□□□□□ -1.39
RIF1-212ENST00000498041 SPDYE5A6NIY4 337 aa6.34□□□□□ -1.39
RIF1-212ENST00000498041 MTMR2Q13614 643 aa6.34□□□□□ -1.39
RIF1-212ENST00000498041 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
RIF1-212ENST00000498041 PROCA1Q8NCQ7 364 aaPredicted RBP6.34□□□□□ -1.39
RIF1-212ENST00000498041 SYMPKQ92797 1274 aaKnown RBP6.34□□□□□ -1.39
RIF1-212ENST00000498041 USB1Q9BQ65 265 aaKnown RBP6.34□□□□□ -1.39
RIF1-212ENST00000498041 ZBTB3Q9H5J0 574 aa6.34□□□□□ -1.39
RIF1-212ENST00000498041 TOR4AQ9NXH8 423 aa6.34□□□□□ -1.39
RIF1-212ENST00000498041 HRCP23327 699 aa6.33□□□□□ -1.4
RIF1-212ENST00000498041 RETREG3Q86VR2 466 aa6.33□□□□□ -1.4
RIF1-212ENST00000498041 NUTM2BA6NNL0 878 aaPredicted RBP6.32□□□□□ -1.4
RIF1-212ENST00000498041 NUTM2EB1AL46 878 aaPredicted RBP6.32□□□□□ -1.4
RIF1-212ENST00000498041 LILRB3O75022 631 aa6.32□□□□□ -1.4
RIF1-212ENST00000498041 TMEM132AQ24JP5 1023 aa6.32□□□□□ -1.4
RIF1-212ENST00000498041 MSS51Q4VC12 460 aa6.32□□□□□ -1.4
RIF1-212ENST00000498041 NUTM2DQ5VT03 806 aaPredicted RBP6.32□□□□□ -1.4
RIF1-212ENST00000498041 NUTM2AQ8IVF1 878 aaPredicted RBP6.32□□□□□ -1.4
RIF1-212ENST00000498041 CCDC24Q8N4L8 307 aa6.32□□□□□ -1.4
RIF1-212ENST00000498041 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.32□□□□□ -1.4
RIF1-212ENST00000498041 QPCTQ16769 361 aa6.31□□□□□ -1.4
RIF1-212ENST00000498041 CABLES1Q8TDN4 633 aa6.31□□□□□ -1.4
RIF1-212ENST00000498041 J3QL48 77 aa6.3□□□□□ -1.4
RIF1-212ENST00000498041 AVPP01185 164 aa6.3□□□□□ -1.4
RIF1-212ENST00000498041 PRR7Q8TB68 274 aa6.3□□□□□ -1.4
RIF1-212ENST00000498041 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
RIF1-212ENST00000498041 CTC1Q2NKJ3 1217 aa6.29□□□□□ -1.4
RIF1-212ENST00000498041 RTL5Q5HYW3 569 aaPredicted RBP6.29□□□□□ -1.4
RIF1-212ENST00000498041 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms