RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ATP6V1AP38606 617 aa7.19□□□□□ -1.26
VPS8-215ENST00000460158 MORN1Q5T089 497 aa7.19□□□□□ -1.26
VPS8-215ENST00000460158 SULF1Q8IWU6 871 aa7.19□□□□□ -1.26
VPS8-215ENST00000460158 FAM217BQ9NTX9 383 aaPredicted RBP7.19□□□□□ -1.26
VPS8-215ENST00000460158 FAM187AA6NFU0 413 aa7.18□□□□□ -1.26
VPS8-215ENST00000460158 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
VPS8-215ENST00000460158 RPIAP49247 311 aa7.18□□□□□ -1.26
VPS8-215ENST00000460158 RDH13Q8NBN7 331 aa7.18□□□□□ -1.26
VPS8-215ENST00000460158 ZNF775Q96BV0 537 aaPredicted RBP7.18□□□□□ -1.26
VPS8-215ENST00000460158 SALL2Q9Y467 1007 aaPredicted RBP7.18□□□□□ -1.26
VPS8-215ENST00000460158 PLEKHG3A1L390 1219 aa7.17□□□□□ -1.26
VPS8-215ENST00000460158 FUT2Q10981 343 aa7.17□□□□□ -1.26
VPS8-215ENST00000460158 THAP11Q96EK4 314 aa7.17□□□□□ -1.26
VPS8-215ENST00000460158 DDX11L8A8MPP1 907 aa7.16□□□□□ -1.26
VPS8-215ENST00000460158 FMNL1O95466 1100 aaPredicted RBP7.16□□□□□ -1.26
VPS8-215ENST00000460158 GCGRP47871 477 aa7.16□□□□□ -1.26
VPS8-215ENST00000460158 DDRGK1Q96HY6 314 aa7.16□□□□□ -1.26
VPS8-215ENST00000460158 CD2BP2O95400 341 aaKnown RBP7.15□□□□□ -1.26
VPS8-215ENST00000460158 PKD2L1Q9P0L9 805 aa7.15□□□□□ -1.26
VPS8-215ENST00000460158 SLC27A5Q9Y2P5 690 aa7.15□□□□□ -1.26
VPS8-215ENST00000460158 BEGAINQ9BUH8 593 aa7.14□□□□□ -1.27
VPS8-215ENST00000460158 FCF1Q9Y324 198 aaKnown RBP7.14□□□□□ -1.27
VPS8-215ENST00000460158 GRIPAP1Q4V328 841 aa7.13□□□□□ -1.27
VPS8-215ENST00000460158 CRIPAKQ8N1N5 446 aa7.13□□□□□ -1.27
VPS8-215ENST00000460158 FAM160A2Q8N612 972 aaPredicted RBP7.13□□□□□ -1.27
VPS8-215ENST00000460158 AAASQ9NRG9 546 aa7.13□□□□□ -1.27
VPS8-215ENST00000460158 CD46P15529 392 aa7.12□□□□□ -1.27
VPS8-215ENST00000460158 FOXC1Q12948 553 aa7.12□□□□□ -1.27
VPS8-215ENST00000460158 BRICD5Q6PL45 260 aa7.12□□□□□ -1.27
VPS8-215ENST00000460158 POTECB2RU33 542 aa7.11□□□□□ -1.27
VPS8-215ENST00000460158 AVPP01185 164 aa7.11□□□□□ -1.27
VPS8-215ENST00000460158 MSS51Q4VC12 460 aa7.11□□□□□ -1.27
VPS8-215ENST00000460158 TOR4AQ9NXH8 423 aa7.11□□□□□ -1.27
VPS8-215ENST00000460158 ST8SIA5O15466 376 aa7.09□□□□□ -1.27
VPS8-215ENST00000460158 ZBTB24O43167 697 aaPredicted RBP7.09□□□□□ -1.27
VPS8-215ENST00000460158 CTC1Q2NKJ3 1217 aa7.09□□□□□ -1.27
VPS8-215ENST00000460158 Q3C1V9 767 aa7.09□□□□□ -1.27
VPS8-215ENST00000460158 CYP4X1Q8N118 509 aa7.09□□□□□ -1.27
VPS8-215ENST00000460158 PRDM9Q9NQV7 894 aa7.08□□□□□ -1.28
VPS8-215ENST00000460158 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
VPS8-215ENST00000460158 RNF19BQ6ZMZ0 732 aa7.07□□□□□ -1.28
VPS8-215ENST00000460158 SPIRE2Q8WWL2 714 aa7.07□□□□□ -1.28
VPS8-215ENST00000460158 TBC1D2Q9BYX2 928 aa7.07□□□□□ -1.28
VPS8-215ENST00000460158 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
VPS8-215ENST00000460158 AXIN1O15169 862 aa7.06□□□□□ -1.28
VPS8-215ENST00000460158 MMP16P51512 607 aa7.06□□□□□ -1.28
VPS8-215ENST00000460158 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
VPS8-215ENST00000460158 MYSM1Q5VVJ2 828 aa7.06□□□□□ -1.28
VPS8-215ENST00000460158 RSPH6AQ9H0K4 717 aa7.06□□□□□ -1.28
VPS8-215ENST00000460158 GOPCQ9HD26 462 aa7.06□□□□□ -1.28
VPS8-215ENST00000460158 WNT7AO00755 349 aa7.05□□□□□ -1.28
VPS8-215ENST00000460158 SKIV2LQ15477 1246 aaKnown RBP7.05□□□□□ -1.28
VPS8-215ENST00000460158 NUTM1Q86Y26 1132 aa7.05□□□□□ -1.28
VPS8-215ENST00000460158 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
VPS8-215ENST00000460158 TTC24A2A3L6 582 aaPredicted RBP7.04□□□□□ -1.28
VPS8-215ENST00000460158 KDM4AO75164 1064 aa7.04□□□□□ -1.28
VPS8-215ENST00000460158 USP46P62068 366 aa7.04□□□□□ -1.28
VPS8-215ENST00000460158 TREML4Q6UXN2 200 aa7.04□□□□□ -1.28
VPS8-215ENST00000460158 TRIM32Q13049 653 aa7.03□□□□□ -1.28
VPS8-215ENST00000460158 DIXDC1Q155Q3 683 aa7.03□□□□□ -1.28
VPS8-215ENST00000460158 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
VPS8-215ENST00000460158 PROCA1Q8NCQ7 364 aaPredicted RBP7.03□□□□□ -1.28
VPS8-215ENST00000460158 SNIP1Q8TAD8 396 aaKnown RBP7.03□□□□□ -1.28
VPS8-215ENST00000460158 PCMTD1Q96MG8 357 aaPredicted RBP7.03□□□□□ -1.28
VPS8-215ENST00000460158 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
VPS8-215ENST00000460158 MOXD2PA6NHM9 499 aa7.02□□□□□ -1.29
VPS8-215ENST00000460158 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
VPS8-215ENST00000460158 NDUFV2P19404 249 aa7.02□□□□□ -1.29
VPS8-215ENST00000460158 LIMD1Q9UGP4 676 aa7.02□□□□□ -1.29
VPS8-215ENST00000460158 DACH1Q9UI36 760 aa7.02□□□□□ -1.29
VPS8-215ENST00000460158 CLK2P49760 499 aaKnown RBP7.01□□□□□ -1.29
VPS8-215ENST00000460158 RIC3Q7Z5B4 369 aa7.01□□□□□ -1.29
VPS8-215ENST00000460158 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
VPS8-215ENST00000460158 C11orf95C9JLR9 678 aaPredicted RBP7□□□□□ -1.29
VPS8-215ENST00000460158 SPTLC1O15269 473 aa7□□□□□ -1.29
VPS8-215ENST00000460158 HOXA2O43364 376 aa7□□□□□ -1.29
VPS8-215ENST00000460158 SMPD1P17405 629 aa7□□□□□ -1.29
VPS8-215ENST00000460158 RSBN1LQ6PCB5 846 aaPredicted RBP7□□□□□ -1.29
VPS8-215ENST00000460158 HLA-CQ95604 372 aa7□□□□□ -1.29
VPS8-215ENST00000460158 GMPR2Q9P2T1 348 aaKnown RBP7□□□□□ -1.29
VPS8-215ENST00000460158 GUCA2AQ02747 115 aa6.99□□□□□ -1.29
VPS8-215ENST00000460158 MRGPRX2Q96LB1 330 aa6.99□□□□□ -1.29
VPS8-215ENST00000460158 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS8-215ENST00000460158 CSPP1Q1MSJ5 1256 aa6.98□□□□□ -1.29
VPS8-215ENST00000460158 FBXO31Q5XUX0 539 aaPredicted RBP6.98□□□□□ -1.29
VPS8-215ENST00000460158 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
VPS8-215ENST00000460158 WFS1O76024 890 aa6.97□□□□□ -1.29
VPS8-215ENST00000460158 FDX1P10109 184 aa6.97□□□□□ -1.29
VPS8-215ENST00000460158 GJA5P36382 358 aa6.97□□□□□ -1.29
VPS8-215ENST00000460158 WNT7BP56706 349 aa6.97□□□□□ -1.29
VPS8-215ENST00000460158 PCDHGC3Q9UN70 934 aa6.97□□□□□ -1.29
VPS8-215ENST00000460158 J3QL48 77 aa6.96□□□□□ -1.3
VPS8-215ENST00000460158 QPCTQ16769 361 aa6.96□□□□□ -1.3
VPS8-215ENST00000460158 TUSC1Q2TAM9 212 aa6.96□□□□□ -1.3
VPS8-215ENST00000460158 ATP13A2Q9NQ11 1180 aa6.96□□□□□ -1.3
VPS8-215ENST00000460158 JUNDP17535 347 aa6.95□□□□□ -1.3
VPS8-215ENST00000460158 RC3H1Q5TC82 1133 aaKnown RBP6.95□□□□□ -1.3
VPS8-215ENST00000460158 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
VPS8-215ENST00000460158 SENP2Q9HC62 589 aa6.95□□□□□ -1.3
VPS8-215ENST00000460158 LILRB3O75022 631 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms