RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SPSB2Q99619 263 aa8.8□□□□□ -1
LINC00393-202ENST00000452852 TBC1D2Q9BYX2 928 aa8.8□□□□□ -1
LINC00393-202ENST00000452852 MOXD2PA6NHM9 499 aa8.79□□□□□ -1
LINC00393-202ENST00000452852 POTECB2RU33 542 aa8.79□□□□□ -1
LINC00393-202ENST00000452852 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
LINC00393-202ENST00000452852 BRICD5Q6PL45 260 aa8.79□□□□□ -1
LINC00393-202ENST00000452852 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
LINC00393-202ENST00000452852 SALL2Q9Y467 1007 aaPredicted RBP8.79□□□□□ -1
LINC00393-202ENST00000452852 NEUROD2Q15784 382 aa8.78□□□□□ -1
LINC00393-202ENST00000452852 Q3C1V9 767 aa8.78□□□□□ -1
LINC00393-202ENST00000452852 S1PR4O95977 384 aa8.77□□□□□ -1.01
LINC00393-202ENST00000452852 FDX1P10109 184 aa8.77□□□□□ -1.01
LINC00393-202ENST00000452852 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
LINC00393-202ENST00000452852 FAM117AQ9C073 453 aa8.77□□□□□ -1.01
LINC00393-202ENST00000452852 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
LINC00393-202ENST00000452852 BRPF1P55201 1214 aaPredicted RBP8.76□□□□□ -1.01
LINC00393-202ENST00000452852 INSM1Q01101 510 aaPredicted RBP8.76□□□□□ -1.01
LINC00393-202ENST00000452852 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
LINC00393-202ENST00000452852 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
LINC00393-202ENST00000452852 SYMPKQ92797 1274 aaKnown RBP8.76□□□□□ -1.01
LINC00393-202ENST00000452852 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
LINC00393-202ENST00000452852 LOC100996750A0A140TA64 210 aa8.75□□□□□ -1.01
LINC00393-202ENST00000452852 KRTAP4-6Q9BYQ5 205 aa8.75□□□□□ -1.01
LINC00393-202ENST00000452852 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
LINC00393-202ENST00000452852 PPEF1O14829 653 aaPredicted RBP8.74□□□□□ -1.01
LINC00393-202ENST00000452852 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
LINC00393-202ENST00000452852 RSBN1LQ6PCB5 846 aaPredicted RBP8.74□□□□□ -1.01
LINC00393-202ENST00000452852 SPTLC1O15269 473 aa8.73□□□□□ -1.01
LINC00393-202ENST00000452852 WFS1O76024 890 aa8.73□□□□□ -1.01
LINC00393-202ENST00000452852 RIC3Q7Z5B4 369 aa8.73□□□□□ -1.01
LINC00393-202ENST00000452852 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
LINC00393-202ENST00000452852 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
LINC00393-202ENST00000452852 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
LINC00393-202ENST00000452852 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
LINC00393-202ENST00000452852 C6orf229H3BNL8 230 aa8.72□□□□□ -1.01
LINC00393-202ENST00000452852 GJA5P36382 358 aa8.72□□□□□ -1.01
LINC00393-202ENST00000452852 MSS51Q4VC12 460 aa8.72□□□□□ -1.01
LINC00393-202ENST00000452852 RSPH6AQ9H0K4 717 aa8.71□□□□□ -1.02
LINC00393-202ENST00000452852 LIMD1Q9UGP4 676 aa8.71□□□□□ -1.02
LINC00393-202ENST00000452852 PCDHB15Q9Y5E8 787 aa8.71□□□□□ -1.02
LINC00393-202ENST00000452852 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
LINC00393-202ENST00000452852 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
LINC00393-202ENST00000452852 POLR3EQ9NVU0 708 aa8.7□□□□□ -1.02
LINC00393-202ENST00000452852 SLC19A1P41440 591 aa8.69□□□□□ -1.02
LINC00393-202ENST00000452852 CSPP1Q1MSJ5 1256 aa8.69□□□□□ -1.02
LINC00393-202ENST00000452852 TRIM67Q6ZTA4 783 aa8.69□□□□□ -1.02
LINC00393-202ENST00000452852 RETREG3Q86VR2 466 aa8.69□□□□□ -1.02
LINC00393-202ENST00000452852 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
LINC00393-202ENST00000452852 MTMR2Q13614 643 aa8.68□□□□□ -1.02
LINC00393-202ENST00000452852 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
LINC00393-202ENST00000452852 HRCP23327 699 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 MMP16P51512 607 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 PRR20EP86478 221 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 PRR20CP86479 221 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 PRR20DP86480 221 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 PRR20BP86481 221 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 PRR20AP86496 221 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 PLA2G2CQ5R387 149 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
LINC00393-202ENST00000452852 FCF1Q9Y324 198 aaKnown RBP8.67□□□□□ -1.02
LINC00393-202ENST00000452852 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
LINC00393-202ENST00000452852 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
LINC00393-202ENST00000452852 QPCTQ16769 361 aa8.66□□□□□ -1.02
LINC00393-202ENST00000452852 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
LINC00393-202ENST00000452852 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
LINC00393-202ENST00000452852 EMID1Q96A84 441 aaPredicted RBP8.66□□□□□ -1.02
LINC00393-202ENST00000452852 ZBTB3Q9H5J0 574 aa8.66□□□□□ -1.02
LINC00393-202ENST00000452852 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
LINC00393-202ENST00000452852 JUNDP17535 347 aa8.65□□□□□ -1.02
LINC00393-202ENST00000452852 TUSC1Q2TAM9 212 aa8.65□□□□□ -1.02
LINC00393-202ENST00000452852 PRPF38BQ5VTL8 546 aaKnown RBP8.65□□□□□ -1.02
LINC00393-202ENST00000452852 PRR7Q8TB68 274 aa8.65□□□□□ -1.02
LINC00393-202ENST00000452852 WIPF1O43516 503 aa8.64□□□□□ -1.03
LINC00393-202ENST00000452852 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
LINC00393-202ENST00000452852 PROCA1Q8NCQ7 364 aaPredicted RBP8.64□□□□□ -1.03
LINC00393-202ENST00000452852 GTF3C3Q9Y5Q9 886 aa8.64□□□□□ -1.03
LINC00393-202ENST00000452852 NUTM2BA6NNL0 878 aaPredicted RBP8.63□□□□□ -1.03
LINC00393-202ENST00000452852 NUTM2EB1AL46 878 aaPredicted RBP8.63□□□□□ -1.03
LINC00393-202ENST00000452852 LILRB3O75022 631 aa8.63□□□□□ -1.03
LINC00393-202ENST00000452852 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
LINC00393-202ENST00000452852 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
LINC00393-202ENST00000452852 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
LINC00393-202ENST00000452852 FAM181BA6NEQ2 426 aa8.62□□□□□ -1.03
LINC00393-202ENST00000452852 CFAP99D6REC4 459 aa8.62□□□□□ -1.03
LINC00393-202ENST00000452852 ST8SIA5O15466 376 aa8.62□□□□□ -1.03
LINC00393-202ENST00000452852 RTL5Q5HYW3 569 aaPredicted RBP8.62□□□□□ -1.03
LINC00393-202ENST00000452852 AAASQ9NRG9 546 aa8.62□□□□□ -1.03
LINC00393-202ENST00000452852 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
LINC00393-202ENST00000452852 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
LINC00393-202ENST00000452852 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
LINC00393-202ENST00000452852 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
LINC00393-202ENST00000452852 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
LINC00393-202ENST00000452852 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00393-202ENST00000452852 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
LINC00393-202ENST00000452852 NUDT12Q9BQG2 462 aa8.59□□□□□ -1.03
LINC00393-202ENST00000452852 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
LINC00393-202ENST00000452852 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
LINC00393-202ENST00000452852 ZNF697Q5TEC3 545 aa8.58□□□□□ -1.04
LINC00393-202ENST00000452852 TSC1Q92574 1164 aa8.58□□□□□ -1.04
LINC00393-202ENST00000452852 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms