RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
PTPN13-203ENST00000427191 EIF3JO75822 258 aaKnown RBP17.33■□□□□ 0.37
PTPN13-203ENST00000427191 PDIA4P13667 645 aaKnown RBP17.33■□□□□ 0.37
PTPN13-203ENST00000427191 EZRP15311 586 aaKnown RBP17.32■□□□□ 0.36
PTPN13-203ENST00000427191 MIA2Q96PC5 1412 aa17.32■□□□□ 0.36
PTPN13-203ENST00000427191 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
PTPN13-203ENST00000427191 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
PTPN13-203ENST00000427191 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
PTPN13-203ENST00000427191 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
PTPN13-203ENST00000427191 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
PTPN13-203ENST00000427191 ERLIN1O75477 346 aa17.31■□□□□ 0.36
PTPN13-203ENST00000427191 WWC2Q6AWC2 1192 aa17.31■□□□□ 0.36
PTPN13-203ENST00000427191 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
PTPN13-203ENST00000427191 ZNHIT6Q9NWK9 470 aaKnown RBP17.31■□□□□ 0.36
PTPN13-203ENST00000427191 MEX3CQ5U5Q3 659 aaKnown RBP17.31■□□□□ 0.36
PTPN13-203ENST00000427191 SYCP1Q15431 976 aa17.3■□□□□ 0.36
PTPN13-203ENST00000427191 DACH1Q9UI36 760 aa17.3■□□□□ 0.36
PTPN13-203ENST00000427191 ZNF396Q96N95 335 aaPredicted RBP17.29■□□□□ 0.36
PTPN13-203ENST00000427191 WASHC2CQ9Y4E1 1318 aa17.29■□□□□ 0.36
PTPN13-203ENST00000427191 CUX1P39880 1505 aa17.29■□□□□ 0.36
PTPN13-203ENST00000427191 SDF4Q9BRK5 362 aa17.29■□□□□ 0.36
PTPN13-203ENST00000427191 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
PTPN13-203ENST00000427191 SLC3A2P08195 630 aaKnown RBP17.28■□□□□ 0.36
PTPN13-203ENST00000427191 TSPYL1Q9H0U9 437 aa17.28■□□□□ 0.36
PTPN13-203ENST00000427191 CDC45O75419 566 aa17.28■□□□□ 0.36
PTPN13-203ENST00000427191 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.36
PTPN13-203ENST00000427191 SEPT7Q16181 437 aaKnown RBP17.27■□□□□ 0.36
PTPN13-203ENST00000427191 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
PTPN13-203ENST00000427191 USP47Q96K76 1375 aa17.27■□□□□ 0.36
PTPN13-203ENST00000427191 ZFYVE27Q5T4F4 411 aa17.27■□□□□ 0.35
PTPN13-203ENST00000427191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.35
PTPN13-203ENST00000427191 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
PTPN13-203ENST00000427191 STIM1Q13586 685 aa17.26■□□□□ 0.35
PTPN13-203ENST00000427191 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
PTPN13-203ENST00000427191 SCAPERQ9BY12 1400 aa17.26■□□□□ 0.35
PTPN13-203ENST00000427191 GNAI1P63096 354 aa17.26■□□□□ 0.35
PTPN13-203ENST00000427191 AXDND1Q5T1B0 1012 aaPredicted RBP17.26■□□□□ 0.35
PTPN13-203ENST00000427191 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
PTPN13-203ENST00000427191 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
PTPN13-203ENST00000427191 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
PTPN13-203ENST00000427191 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
PTPN13-203ENST00000427191 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
PTPN13-203ENST00000427191 PDILTQ8N807 584 aa17.25■□□□□ 0.35
PTPN13-203ENST00000427191 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
PTPN13-203ENST00000427191 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
PTPN13-203ENST00000427191 DESP17661 470 aa17.24■□□□□ 0.35
PTPN13-203ENST00000427191 KIF3BO15066 747 aa17.23■□□□□ 0.35
PTPN13-203ENST00000427191 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
PTPN13-203ENST00000427191 ANKRD1Q15327 319 aa17.23■□□□□ 0.35
PTPN13-203ENST00000427191 RAD21O60216 631 aa17.23■□□□□ 0.35
PTPN13-203ENST00000427191 PANK3Q9H999 370 aa17.23■□□□□ 0.35
PTPN13-203ENST00000427191 CBFA2T2O43439 604 aa17.22■□□□□ 0.35
PTPN13-203ENST00000427191 FOXD1Q16676 465 aa17.22■□□□□ 0.35
PTPN13-203ENST00000427191 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
PTPN13-203ENST00000427191 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
PTPN13-203ENST00000427191 GBP2P32456 591 aaPredicted RBP17.22■□□□□ 0.35
PTPN13-203ENST00000427191 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
PTPN13-203ENST00000427191 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
PTPN13-203ENST00000427191 EVA1CP58658 441 aa17.22■□□□□ 0.35
PTPN13-203ENST00000427191 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
PTPN13-203ENST00000427191 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
PTPN13-203ENST00000427191 PDCL2Q8N4E4 241 aa17.21■□□□□ 0.35
PTPN13-203ENST00000427191 ERC1Q8IUD2 1116 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 RBM33Q96EV2 1170 aaKnown RBP17.2■□□□□ 0.34
PTPN13-203ENST00000427191 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
PTPN13-203ENST00000427191 TBC1D2BQ9UPU7 963 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 SOGA1O94964 1423 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 SMC2O95347 1197 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 NEFHP12036 1026 aa17.2■□□□□ 0.34
PTPN13-203ENST00000427191 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
PTPN13-203ENST00000427191 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
PTPN13-203ENST00000427191 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
PTPN13-203ENST00000427191 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
PTPN13-203ENST00000427191 MSH5O43196 834 aa17.18■□□□□ 0.34
PTPN13-203ENST00000427191 DYDC1Q8WWB3 177 aa17.18■□□□□ 0.34
PTPN13-203ENST00000427191 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
PTPN13-203ENST00000427191 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
PTPN13-203ENST00000427191 CCDC181Q5TID7 509 aa17.17■□□□□ 0.34
PTPN13-203ENST00000427191 PPFIBP1Q86W92 1011 aa17.17■□□□□ 0.34
PTPN13-203ENST00000427191 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
PTPN13-203ENST00000427191 MCM3P25205 808 aa17.17■□□□□ 0.34
PTPN13-203ENST00000427191 TRIM21P19474 475 aaKnown RBP17.17■□□□□ 0.34
PTPN13-203ENST00000427191 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
PTPN13-203ENST00000427191 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
PTPN13-203ENST00000427191 EXOC6Q8TAG9 804 aa17.16■□□□□ 0.34
PTPN13-203ENST00000427191 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
PTPN13-203ENST00000427191 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 HSP90AB3PQ58FF7 597 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 TOP2AP11388 1531 aaKnown RBP17.15■□□□□ 0.34
PTPN13-203ENST00000427191 GNAI3P08754 354 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 GBP3Q9H0R5 595 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
PTPN13-203ENST00000427191 CCDC7Q96M83 1385 aa17.14■□□□□ 0.34
PTPN13-203ENST00000427191 RIPK4P57078 832 aa17.14■□□□□ 0.33
PTPN13-203ENST00000427191 FAM107BQ9H098 131 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms