RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
RAD50-201ENST00000378823 RIPK4P57078 832 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 CAGE1Q8TC20 777 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 FHOD3Q2V2M9 1422 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 H0YHG0 523 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
RAD50-201ENST00000378823 XBP1P17861 261 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 OFD1O75665 1012 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
RAD50-201ENST00000378823 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
RAD50-201ENST00000378823 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
RAD50-201ENST00000378823 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
RAD50-201ENST00000378823 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
RAD50-201ENST00000378823 HSP90AB2PQ58FF8 381 aa13.49□□□□□ -0.25
RAD50-201ENST00000378823 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
RAD50-201ENST00000378823 MRE11P49959 708 aa13.49□□□□□ -0.25
RAD50-201ENST00000378823 PDILTQ8N807 584 aa13.49□□□□□ -0.25
RAD50-201ENST00000378823 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.49□□□□□ -0.25
RAD50-201ENST00000378823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.252e-9■■■■■ 37.3
RAD50-201ENST00000378823 PSMA5P28066 241 aa13.49□□□□□ -0.25
RAD50-201ENST00000378823 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
RAD50-201ENST00000378823 LNPKQ9C0E8 428 aa13.48□□□□□ -0.25
RAD50-201ENST00000378823 FOSBP53539 338 aa13.48□□□□□ -0.25
RAD50-201ENST00000378823 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
RAD50-201ENST00000378823 ZFYVE27Q5T4F4 411 aa13.48□□□□□ -0.25
RAD50-201ENST00000378823 CUX1P39880 1505 aa13.47□□□□□ -0.25
RAD50-201ENST00000378823 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
RAD50-201ENST00000378823 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
RAD50-201ENST00000378823 CCP110O43303 1012 aa13.47□□□□□ -0.25
RAD50-201ENST00000378823 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
RAD50-201ENST00000378823 PDCP20941 246 aa13.46□□□□□ -0.25
RAD50-201ENST00000378823 CNTROBQ8N137 903 aa13.46□□□□□ -0.25
RAD50-201ENST00000378823 TRIM5Q9C035 493 aa13.46□□□□□ -0.25
RAD50-201ENST00000378823 SYTL4Q96C24 671 aaPredicted RBP13.45□□□□□ -0.26
RAD50-201ENST00000378823 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
RAD50-201ENST00000378823 PSME1Q06323 249 aa13.45□□□□□ -0.26
RAD50-201ENST00000378823 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
RAD50-201ENST00000378823 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
RAD50-201ENST00000378823 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
RAD50-201ENST00000378823 MSH5O43196 834 aa13.45□□□□□ -0.26
RAD50-201ENST00000378823 KIF7Q2M1P5 1343 aa13.45□□□□□ -0.26
RAD50-201ENST00000378823 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
RAD50-201ENST00000378823 MINK1Q8N4C8 1332 aaPredicted RBP13.44□□□□□ -0.26
RAD50-201ENST00000378823 MBD3O95983 291 aa13.44□□□□□ -0.26
RAD50-201ENST00000378823 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
RAD50-201ENST00000378823 TSPYL4Q9UJ04 414 aa13.44□□□□□ -0.26
RAD50-201ENST00000378823 MCM2P49736 904 aa13.44□□□□□ -0.26
RAD50-201ENST00000378823 GNAI1P63096 354 aa13.44□□□□□ -0.26
RAD50-201ENST00000378823 LEKR1Q6ZMV7 388 aa13.44□□□□□ -0.26
RAD50-201ENST00000378823 SART3Q15020 963 aaKnown RBP13.43□□□□□ -0.26
RAD50-201ENST00000378823 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
RAD50-201ENST00000378823 HMGN5P82970 282 aaKnown RBP13.43□□□□□ -0.26
RAD50-201ENST00000378823 TRAK2O60296 914 aa13.43□□□□□ -0.26
RAD50-201ENST00000378823 FILIP1LQ4L180 1135 aa13.43□□□□□ -0.26
RAD50-201ENST00000378823 CDC45O75419 566 aa13.43□□□□□ -0.26
RAD50-201ENST00000378823 TXLNAP40222 546 aa13.42□□□□□ -0.26
RAD50-201ENST00000378823 SMC2O95347 1197 aa13.42□□□□□ -0.26
RAD50-201ENST00000378823 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
RAD50-201ENST00000378823 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
RAD50-201ENST00000378823 ZRSR2Q15696 482 aaKnown RBP13.42□□□□□ -0.26
RAD50-201ENST00000378823 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
RAD50-201ENST00000378823 RNF214Q8ND24 703 aa13.42□□□□□ -0.26
RAD50-201ENST00000378823 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
RAD50-201ENST00000378823 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
RAD50-201ENST00000378823 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
RAD50-201ENST00000378823 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
RAD50-201ENST00000378823 GOLGA6L10A6NI86 522 aa13.41□□□□□ -0.26
RAD50-201ENST00000378823 CCDC27Q2M243 656 aa13.41□□□□□ -0.26
RAD50-201ENST00000378823 TSPY26PQ9H489 355 aa13.4□□□□□ -0.26
RAD50-201ENST00000378823 ERLIN2O94905 339 aa13.4□□□□□ -0.26
RAD50-201ENST00000378823 HIP1O00291 1037 aa13.4□□□□□ -0.26
RAD50-201ENST00000378823 DHX8Q14562 1220 aaKnown RBP13.4□□□□□ -0.26
RAD50-201ENST00000378823 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
RAD50-201ENST00000378823 SYCP1Q15431 976 aa13.39□□□□□ -0.27
RAD50-201ENST00000378823 PANK1Q8TE04 598 aa13.39□□□□□ -0.27
RAD50-201ENST00000378823 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
RAD50-201ENST00000378823 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
RAD50-201ENST00000378823 FYB1O15117 783 aa13.38□□□□□ -0.27
RAD50-201ENST00000378823 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
RAD50-201ENST00000378823 LUC7LQ9NQ29 371 aaKnown RBP13.38□□□□□ -0.27
RAD50-201ENST00000378823 HMOX1P09601 288 aa13.38□□□□□ -0.27
RAD50-201ENST00000378823 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
RAD50-201ENST00000378823 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
RAD50-201ENST00000378823 ZNF396Q96N95 335 aaPredicted RBP13.37□□□□□ -0.27
RAD50-201ENST00000378823 TSPYL1Q9H0U9 437 aa13.37□□□□□ -0.27
RAD50-201ENST00000378823 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
RAD50-201ENST00000378823 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
RAD50-201ENST00000378823 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
RAD50-201ENST00000378823 IKQ13123 557 aaPredicted RBP13.37□□□□□ -0.27
RAD50-201ENST00000378823 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
RAD50-201ENST00000378823 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
RAD50-201ENST00000378823 NEFHP12036 1026 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
RAD50-201ENST00000378823 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 SEPT7Q16181 437 aaKnown RBP13.36□□□□□ -0.27
RAD50-201ENST00000378823 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
RAD50-201ENST00000378823 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms