RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 APAF1O14727 1248 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 SMARCE1Q969G3 411 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 XBP1P17861 261 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 TSPY26PQ9H489 355 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 OFD1O75665 1012 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
SPEN-201ENST00000375759 PDILTQ8N807 584 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
SPEN-201ENST00000375759 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
SPEN-201ENST00000375759 VPS37DQ86XT2 251 aa11.81□□□□□ -0.52
SPEN-201ENST00000375759 CAVIN1Q6NZI2 390 aaKnown RBP11.81□□□□□ -0.52
SPEN-201ENST00000375759 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
SPEN-201ENST00000375759 RIPK4P57078 832 aa11.8□□□□□ -0.52
SPEN-201ENST00000375759 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.524e-8■■■■□ 23
SPEN-201ENST00000375759 CECR2Q9BXF3 1484 aa11.8□□□□□ -0.52
SPEN-201ENST00000375759 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
SPEN-201ENST00000375759 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
SPEN-201ENST00000375759 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
SPEN-201ENST00000375759 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPEN-201ENST00000375759 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
SPEN-201ENST00000375759 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
SPEN-201ENST00000375759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
SPEN-201ENST00000375759 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
SPEN-201ENST00000375759 CUX1P39880 1505 aa11.79□□□□□ -0.52
SPEN-201ENST00000375759 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
SPEN-201ENST00000375759 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 FILIP1LQ4L180 1135 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 FHOD3Q2V2M9 1422 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 GNAI1P63096 354 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 ZRSR2Q15696 482 aaKnown RBP11.78□□□□□ -0.52
SPEN-201ENST00000375759 CNTROBQ8N137 903 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
SPEN-201ENST00000375759 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 SMC2O95347 1197 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 TAF3Q5VWG9 929 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 CNTLNQ9NXG0 1405 aa11.78□□□□□ -0.52
SPEN-201ENST00000375759 ERLIN2O94905 339 aa11.77□□□□□ -0.52
SPEN-201ENST00000375759 EIF2S2P20042 333 aaKnown RBP11.77□□□□□ -0.52
SPEN-201ENST00000375759 TSPYL1Q9H0U9 437 aa11.77□□□□□ -0.52
SPEN-201ENST00000375759 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
SPEN-201ENST00000375759 GOLGA6L7A0A1B0GV03 622 aa11.77□□□□□ -0.52
SPEN-201ENST00000375759 RABEP1Q15276 862 aa11.77□□□□□ -0.52
SPEN-201ENST00000375759 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.52
SPEN-201ENST00000375759 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
SPEN-201ENST00000375759 KIAA0754O94854 1291 aa11.77□□□□□ -0.53
SPEN-201ENST00000375759 RAD21O60216 631 aa11.77□□□□□ -0.53
SPEN-201ENST00000375759 CT47B1P0C2W7 299 aaPredicted RBP11.77□□□□□ -0.53
SPEN-201ENST00000375759 RRP9O43818 475 aaKnown RBP11.76□□□□□ -0.53
SPEN-201ENST00000375759 HIP1O00291 1037 aa11.76□□□□□ -0.53
SPEN-201ENST00000375759 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■■■ 79
SPEN-201ENST00000375759 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
SPEN-201ENST00000375759 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
SPEN-201ENST00000375759 KAT6BQ8WYB5 2073 aa11.76□□□□□ -0.53
SPEN-201ENST00000375759 TXLNBQ8N3L3 684 aa11.76□□□□□ -0.53
SPEN-201ENST00000375759 CWC22Q9HCG8 908 aaKnown RBP11.76□□□□□ -0.53
SPEN-201ENST00000375759 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
SPEN-201ENST00000375759 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
SPEN-201ENST00000375759 USP8P40818 1118 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 NUTM2DQ5VT03 806 aaPredicted RBP11.75□□□□□ -0.53
SPEN-201ENST00000375759 CCDC192P0DO97 292 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 LUC7LQ9NQ29 371 aaKnown RBP11.75□□□□□ -0.53
SPEN-201ENST00000375759 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
SPEN-201ENST00000375759 TXLNAP40222 546 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
SPEN-201ENST00000375759 FOSBP53539 338 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
SPEN-201ENST00000375759 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
SPEN-201ENST00000375759 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
SPEN-201ENST00000375759 ZFYVE27Q5T4F4 411 aa11.74□□□□□ -0.53
SPEN-201ENST00000375759 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
SPEN-201ENST00000375759 ERLIN1O75477 346 aa11.73□□□□□ -0.53
SPEN-201ENST00000375759 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
SPEN-201ENST00000375759 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
SPEN-201ENST00000375759 CCDC112Q8NEF3 446 aa11.73□□□□□ -0.53
SPEN-201ENST00000375759 IQCEQ6IPM2 695 aa11.73□□□□□ -0.53
SPEN-201ENST00000375759 BRPF3Q9ULD4 1205 aa11.73□□□□□ -0.53
SPEN-201ENST00000375759 PRPF40AO75400 957 aaKnown RBP11.73□□□□□ -0.53
SPEN-201ENST00000375759 UBTFL1P0CB47 393 aaPredicted RBP11.72□□□□□ -0.53
SPEN-201ENST00000375759 PANK1Q8TE04 598 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 HSP90AB3PQ58FF7 597 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 EVA1CP58658 441 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 INCENPQ9NQS7 918 aa11.72□□□□□ -0.53
SPEN-201ENST00000375759 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
SPEN-201ENST00000375759 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
SPEN-201ENST00000375759 NEK4P51957 841 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 ANKRD1Q15327 319 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 AEBP1Q8IUX7 1158 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 STAC3Q96MF2 364 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 WASHC4Q2M389 1173 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms