RNA–Protein interactions for RNA: ENST00000372901.1

UBR2-202, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-202ENST00000372901 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
UBR2-202ENST00000372901 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
UBR2-202ENST00000372901 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
UBR2-202ENST00000372901 SKIDA1Q1XH10 827 aa17.3■□□□□ 0.36
UBR2-202ENST00000372901 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
UBR2-202ENST00000372901 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
UBR2-202ENST00000372901 PDILTQ8N807 584 aa17.29■□□□□ 0.36
UBR2-202ENST00000372901 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
UBR2-202ENST00000372901 GNL3LQ9NVN8 582 aaKnown RBP17.29■□□□□ 0.36
UBR2-202ENST00000372901 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
UBR2-202ENST00000372901 ERLIN2O94905 339 aa17.29■□□□□ 0.36
UBR2-202ENST00000372901 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
UBR2-202ENST00000372901 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
UBR2-202ENST00000372901 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
UBR2-202ENST00000372901 HSP90B2PQ58FF3 399 aa17.28■□□□□ 0.36
UBR2-202ENST00000372901 CCDC18Q5T9S5 1454 aa17.27■□□□□ 0.36
UBR2-202ENST00000372901 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
UBR2-202ENST00000372901 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
UBR2-202ENST00000372901 KDM4AO75164 1064 aa17.27■□□□□ 0.35
UBR2-202ENST00000372901 ARGLU1Q9NWB6 273 aaPredicted RBP17.26■□□□□ 0.35
UBR2-202ENST00000372901 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
UBR2-202ENST00000372901 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
UBR2-202ENST00000372901 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
UBR2-202ENST00000372901 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
UBR2-202ENST00000372901 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
UBR2-202ENST00000372901 TTLL5Q6EMB2 1281 aa17.26■□□□□ 0.35
UBR2-202ENST00000372901 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
UBR2-202ENST00000372901 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
UBR2-202ENST00000372901 SMARCE1Q969G3 411 aa17.25■□□□□ 0.35
UBR2-202ENST00000372901 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
UBR2-202ENST00000372901 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
UBR2-202ENST00000372901 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
UBR2-202ENST00000372901 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
UBR2-202ENST00000372901 WDR70Q9NW82 654 aa17.23■□□□□ 0.35
UBR2-202ENST00000372901 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
UBR2-202ENST00000372901 STRN4Q9NRL3 753 aa17.23■□□□□ 0.35
UBR2-202ENST00000372901 GBP2P32456 591 aaPredicted RBP17.23■□□□□ 0.35
UBR2-202ENST00000372901 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
UBR2-202ENST00000372901 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
UBR2-202ENST00000372901 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
UBR2-202ENST00000372901 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
UBR2-202ENST00000372901 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
UBR2-202ENST00000372901 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
UBR2-202ENST00000372901 ENOX2Q16206 610 aaKnown RBP17.22■□□□□ 0.35
UBR2-202ENST00000372901 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
UBR2-202ENST00000372901 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
UBR2-202ENST00000372901 PSMA5P28066 241 aa17.21■□□□□ 0.35
UBR2-202ENST00000372901 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
UBR2-202ENST00000372901 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
UBR2-202ENST00000372901 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
UBR2-202ENST00000372901 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
UBR2-202ENST00000372901 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
UBR2-202ENST00000372901 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
UBR2-202ENST00000372901 SOGA1O94964 1423 aa17.2■□□□□ 0.34
UBR2-202ENST00000372901 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
UBR2-202ENST00000372901 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
UBR2-202ENST00000372901 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
UBR2-202ENST00000372901 H0YHG0 523 aa17.19■□□□□ 0.34
UBR2-202ENST00000372901 LUC7LQ9NQ29 371 aaKnown RBP17.19■□□□□ 0.34
UBR2-202ENST00000372901 E9PSI1 815 aa17.19■□□□□ 0.34
UBR2-202ENST00000372901 DRC1Q96MC2 740 aa17.18■□□□□ 0.34
UBR2-202ENST00000372901 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
UBR2-202ENST00000372901 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
UBR2-202ENST00000372901 IFT57Q9NWB7 429 aa17.18■□□□□ 0.34
UBR2-202ENST00000372901 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
UBR2-202ENST00000372901 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
UBR2-202ENST00000372901 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
UBR2-202ENST00000372901 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
UBR2-202ENST00000372901 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
UBR2-202ENST00000372901 RIPK4P57078 832 aa17.17■□□□□ 0.34
UBR2-202ENST00000372901 GOLGA6L10A6NI86 522 aa17.17■□□□□ 0.34
UBR2-202ENST00000372901 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
UBR2-202ENST00000372901 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
UBR2-202ENST00000372901 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
UBR2-202ENST00000372901 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 15.3
UBR2-202ENST00000372901 ZNF76P36508 570 aa17.17■□□□□ 0.34
UBR2-202ENST00000372901 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
UBR2-202ENST00000372901 STIM1Q13586 685 aa17.16■□□□□ 0.34
UBR2-202ENST00000372901 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
UBR2-202ENST00000372901 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
UBR2-202ENST00000372901 SCLT1Q96NL6 688 aa17.16■□□□□ 0.34
UBR2-202ENST00000372901 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
UBR2-202ENST00000372901 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
UBR2-202ENST00000372901 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
UBR2-202ENST00000372901 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
UBR2-202ENST00000372901 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
UBR2-202ENST00000372901 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
UBR2-202ENST00000372901 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
UBR2-202ENST00000372901 PANK3Q9H999 370 aa17.15■□□□□ 0.34
UBR2-202ENST00000372901 TXLNBQ8N3L3 684 aa17.14■□□□□ 0.34
UBR2-202ENST00000372901 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
UBR2-202ENST00000372901 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
UBR2-202ENST00000372901 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
UBR2-202ENST00000372901 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
UBR2-202ENST00000372901 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
UBR2-202ENST00000372901 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
UBR2-202ENST00000372901 ATP2B1P20020 1258 aa17.13■□□□□ 0.33
UBR2-202ENST00000372901 DEF6Q9H4E7 631 aa17.13■□□□□ 0.33
UBR2-202ENST00000372901 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
UBR2-202ENST00000372901 PPP4R3AQ6IN85 833 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms