RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 TIGD1Q96MW7 591 aa10.37□□□□□ -0.75
VANGL1-204ENST00000369510 NAP1L3Q99457 506 aaPredicted RBP10.37□□□□□ -0.75
VANGL1-204ENST00000369510 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
VANGL1-204ENST00000369510 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
VANGL1-204ENST00000369510 EIF3DO15371 548 aaKnown RBP eCLIP10.37□□□□□ -0.75
VANGL1-204ENST00000369510 MAP9Q49MG5 647 aa10.37□□□□□ -0.75
VANGL1-204ENST00000369510 HOMEZQ8IX15 550 aa10.37□□□□□ -0.75
VANGL1-204ENST00000369510 GZF1Q9H116 711 aaPredicted RBP10.37□□□□□ -0.75
VANGL1-204ENST00000369510 VIMP08670 466 aaKnown RBP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 SAFBQ15424 915 aaKnown RBP eCLIP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 RBM28Q9NW13 759 aaKnown RBP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 CPSF2Q9P2I0 782 aaKnown RBP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 MKRN1Q9UHC7 482 aaKnown RBP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 FILIP1LQ4L180 1135 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 SASS6Q6UVJ0 657 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 PPFIA2O75334 1257 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
VANGL1-204ENST00000369510 IFT57Q9NWB7 429 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 CALCOCO1Q9P1Z2 691 aa10.36□□□□□ -0.75
VANGL1-204ENST00000369510 PPFIBP2Q8ND30 876 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 GCOM1H8Y6P7 765 aaPredicted RBP10.35□□□□□ -0.75
VANGL1-204ENST00000369510 MYZAPP0CAP1 466 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 CCDC174Q6PII3 467 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
VANGL1-204ENST00000369510 XBP1P17861 261 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 SEPT8Q92599 483 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 HOMER2Q9NSB8 354 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 SPAG9O60271 1321 aaKnown RBP10.35□□□□□ -0.75
VANGL1-204ENST00000369510 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
VANGL1-204ENST00000369510 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
VANGL1-204ENST00000369510 ZFYP08048 801 aaPredicted RBP10.34□□□□□ -0.75
VANGL1-204ENST00000369510 RNF168Q8IYW5 571 aaPredicted RBP10.34□□□□□ -0.75
VANGL1-204ENST00000369510 TNIKQ9UKE5 1360 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 SPECC1LQ69YQ0 1117 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 HSPA5P11021 654 aaKnown RBP10.34□□□□□ -0.75
VANGL1-204ENST00000369510 EPB41L2O43491 1005 aaKnown RBP10.34□□□□□ -0.75
VANGL1-204ENST00000369510 AEBP2Q6ZN18 517 aaPredicted RBP10.34□□□□□ -0.75
VANGL1-204ENST00000369510 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 CCDC96Q2M329 555 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 JAKMIP3Q5VZ66 844 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 NUCB2P80303 420 aa10.34□□□□□ -0.75
VANGL1-204ENST00000369510 PABPN1LA6NDY0 278 aaKnown RBP10.33□□□□□ -0.76
VANGL1-204ENST00000369510 NCAPGQ9BPX3 1015 aa10.33□□□□□ -0.76
VANGL1-204ENST00000369510 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
VANGL1-204ENST00000369510 PPP1R12BO60237 982 aaPredicted RBP10.33□□□□□ -0.76
VANGL1-204ENST00000369510 NEBLO76041 1014 aa10.33□□□□□ -0.76
VANGL1-204ENST00000369510 MIPOL1Q8TD10 442 aa10.33□□□□□ -0.76
VANGL1-204ENST00000369510 ZNF526Q8TF50 670 aaPredicted RBP10.33□□□□□ -0.76
VANGL1-204ENST00000369510 DNAJC21Q5F1R6 531 aaKnown RBP10.33□□□□□ -0.76
VANGL1-204ENST00000369510 CEP135Q66GS9 1140 aa10.33□□□□□ -0.76
VANGL1-204ENST00000369510 ZMAT2Q96NC0 199 aaKnown RBP10.33□□□□□ -0.76
VANGL1-204ENST00000369510 MAGEC2Q9UBF1 373 aaPredicted RBP10.33□□□□□ -0.76
VANGL1-204ENST00000369510 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
VANGL1-204ENST00000369510 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
VANGL1-204ENST00000369510 KIF5CO60282 957 aa10.32□□□□□ -0.76
VANGL1-204ENST00000369510 SH2D4BQ5SQS7 431 aa10.32□□□□□ -0.76
VANGL1-204ENST00000369510 KIF2AO00139 706 aaPredicted RBP10.32□□□□□ -0.76
VANGL1-204ENST00000369510 DDX49Q9Y6V7 483 aaKnown RBP10.32□□□□□ -0.76
VANGL1-204ENST00000369510 CCDC181Q5TID7 509 aa10.32□□□□□ -0.76
VANGL1-204ENST00000369510 FEZ2Q9UHY8 353 aaPredicted RBP10.32□□□□□ -0.76
VANGL1-204ENST00000369510 CARMIL2Q6F5E8 1435 aa10.32□□□□□ -0.76
VANGL1-204ENST00000369510 CCDC158Q5M9N0 1113 aa10.31□□□□□ -0.76
VANGL1-204ENST00000369510 ZNF853P0CG23 659 aa10.31□□□□□ -0.76
VANGL1-204ENST00000369510 TMF1P82094 1093 aa10.31□□□□□ -0.76
VANGL1-204ENST00000369510 CTR9Q6PD62 1173 aa10.31□□□□□ -0.76
VANGL1-204ENST00000369510 TACC1O75410 805 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 MLECQ14165 292 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 AEBP1Q8IUX7 1158 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 TAOK3Q9H2K8 898 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 CFAP45Q9UL16 551 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 REC8O95072 547 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 ZKSCAN1P17029 563 aaPredicted RBP10.3□□□□□ -0.76
VANGL1-204ENST00000369510 DZIP1Q86YF9 867 aaKnown RBP10.3□□□□□ -0.76
VANGL1-204ENST00000369510 LRRC45Q96CN5 670 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 ANAPC4Q9UJX5 808 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 DACH1Q9UI36 760 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 ERICH2A1L162 156 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
VANGL1-204ENST00000369510 STIM1Q13586 685 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 GSE1Q14687 1217 aa10.3□□□□□ -0.76
VANGL1-204ENST00000369510 DYNC1I1O14576 645 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 KANK4Q5T7N3 995 aaPredicted RBP10.29□□□□□ -0.76
VANGL1-204ENST00000369510 TAX1BP1Q86VP1 789 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 FERMT1Q9BQL6 677 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 RRP9O43818 475 aaKnown RBP10.29□□□□□ -0.76
VANGL1-204ENST00000369510 ANAPC15P60006 121 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 MAP4K4O95819 1239 aaPredicted RBP10.29□□□□□ -0.76
VANGL1-204ENST00000369510 PRPF31Q8WWY3 499 aaKnown RBP10.29□□□□□ -0.76
VANGL1-204ENST00000369510 CPLX1O14810 134 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 ERC2O15083 957 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 PRPF40AO75400 957 aaKnown RBP10.29□□□□□ -0.76
VANGL1-204ENST00000369510 FOXD1Q16676 465 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 SOGA1O94964 1423 aa10.29□□□□□ -0.76
VANGL1-204ENST00000369510 TRDNQ13061 729 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms