RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 IKQ13123 557 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 CDK5RAP3Q96JB5 506 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 CALRP27797 417 aaKnown RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 FAM161AQ3B820 660 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 INTS3Q68E01 1043 aaKnown RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 ERC1Q8IUD2 1116 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 MINK1Q8N4C8 1332 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 DZIP1LQ8IYY4 767 aaKnown RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 SYCP1Q15431 976 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 GAS2L2Q8NHY3 880 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 IPO9Q96P70 1041 aaKnown RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC7Q96M83 1385 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 NUTM2FA1L443 756 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 HNRNPMP52272 730 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 NUCB2P80303 420 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 OLFM4Q6UX06 510 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 HOMER1Q86YM7 354 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 PLEKHH2Q8IVE3 1493 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 KIF6Q6ZMV9 814 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 EIF2S2P20042 333 aaKnown RBP4.88□□□□□ -1.63
SCN3A-201ENST00000283254 NAP1L1P55209 391 aaKnown RBP4.88□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC88BA6NC98 1476 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 UBTFL1P0CB47 393 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-201ENST00000283254 ANKRD45Q5TZF3 282 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 PDIA4P13667 645 aaKnown RBP4.88□□□□□ -1.63
SCN3A-201ENST00000283254 HSP90AB2PQ58FF8 381 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 NOM1Q5C9Z4 860 aaKnown RBP4.88□□□□□ -1.63
SCN3A-201ENST00000283254 CAGE1Q8TC20 777 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 ZBED9Q6R2W3 1325 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 STIM1Q13586 685 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 ZFYVE27Q5T4F4 411 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 TRIM22Q8IYM9 498 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 TMOD2Q9NZR1 351 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 SMC3Q9UQE7 1217 aa4.88□□□□□ -1.63
SCN3A-201ENST00000283254 VPS37CA5D8V6 355 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 KRT18P05783 430 aaKnown RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 MNS1Q8NEH6 495 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 NUTM2DQ5VT03 806 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 CHMP5Q9NZZ3 219 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 ERLIN2O94905 339 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 PLEKHO1Q53GL0 409 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 PNISRQ8TF01 805 aaKnown RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 KINO60870 393 aaKnown RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 WASHC4Q2M389 1173 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 ST20-MTHFSA0A0A6YYL1 179 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC146Q8IYE0 955 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 CLASRPQ8N2M8 674 aaKnown RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 SMARCE1Q969G3 411 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-201ENST00000283254 CYB5RLQ6IPT4 315 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 SASS6Q6UVJ0 657 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 PANK3Q9H999 370 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 CNTLNQ9NXG0 1405 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 MCM2P49736 904 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 RIC3Q7Z5B4 369 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 NEUROD6Q96NK8 337 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 FSD1Q9BTV5 496 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 TSPYL4Q9UJ04 414 aa4.87□□□□□ -1.63
SCN3A-201ENST00000283254 CDKL5O76039 1030 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 DEKP35659 375 aaKnown RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 FAM69CQ0P6D2 419 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 THEMISQ8N1K5 641 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 ZNHIT6Q9NWK9 470 aaKnown RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 GOLGA6L7A0A1B0GV03 622 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 MBD3O95983 291 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 RTN4Q9NQC3 1192 aaKnown RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 FANCD2Q9BXW9 1451 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 CDC45O75419 566 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 RUNDC1Q96C34 613 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 RIPK4P57078 832 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 SDF4Q9BRK5 362 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 ZNF287Q9HBT7 754 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 IQCEQ6IPM2 695 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 ZNF396Q96N95 335 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 MAGEC2Q9UBF1 373 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 NLRP6P59044 892 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC27Q2M243 656 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 ZSCAN25Q6NSZ9 544 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-201ENST00000283254 CNTROBQ8N137 903 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 RSPH6AQ9H0K4 717 aa4.86□□□□□ -1.63
SCN3A-201ENST00000283254 PPP1R12BO60237 982 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 PROSER2Q86WR7 435 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 FILIP1LQ4L180 1135 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC30Q5VVM6 783 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 BMP2KQ9NSY1 1161 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 RRP7AQ9Y3A4 280 aaKnown RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 DAPK1P53355 1430 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 MTERF4Q7Z6M4 381 aaKnown RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 CWC15Q9P013 229 aaKnown RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 LETM1O95202 739 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 RABEP1Q15276 862 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 PEG3Q9GZU2 1588 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 CT47B1P0C2W7 299 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 PDCL3Q9H2J4 239 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 TATP17735 454 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-201ENST00000283254 HFM1A2PYH4 1435 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 GOLGA6L10A6NI86 522 aa4.85□□□□□ -1.63
SCN3A-201ENST00000283254 POTEJP0CG39 1038 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms