RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 FAM193AP78312 1265 aa14.99□□□□□ -0.01
ARFGEF1-201ENST00000262215 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
ARFGEF1-201ENST00000262215 CT47B1P0C2W7 299 aaPredicted RBP14.99□□□□□ -0.01
ARFGEF1-201ENST00000262215 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.013e-6■■□□□ 12.2
ARFGEF1-201ENST00000262215 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
ARFGEF1-201ENST00000262215 L3MBTL2Q969R5 705 aa14.99□□□□□ -0.01
ARFGEF1-201ENST00000262215 NASPP49321 788 aaPredicted RBP14.99□□□□□ -0.01
ARFGEF1-201ENST00000262215 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
ARFGEF1-201ENST00000262215 CAVIN1Q6NZI2 390 aaKnown RBP14.98□□□□□ -0.01
ARFGEF1-201ENST00000262215 EEA1Q15075 1411 aa14.98□□□□□ -0.01
ARFGEF1-201ENST00000262215 ZHX3Q9H4I2 956 aa14.97□□□□□ -0.01
ARFGEF1-201ENST00000262215 CCDC97Q96F63 343 aaPredicted RBP14.97□□□□□ -0.01
ARFGEF1-201ENST00000262215 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
ARFGEF1-201ENST00000262215 SEPT7Q16181 437 aaKnown RBP14.97□□□□□ -0.01
ARFGEF1-201ENST00000262215 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
ARFGEF1-201ENST00000262215 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
ARFGEF1-201ENST00000262215 ATP2B2Q01814 1243 aa14.96□□□□□ -0.01
ARFGEF1-201ENST00000262215 ERCC6Q03468 1493 aa14.96□□□□□ -0.01
ARFGEF1-201ENST00000262215 LEKR1Q6ZMV7 388 aa14.96□□□□□ -0.01
ARFGEF1-201ENST00000262215 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
ARFGEF1-201ENST00000262215 KIF27Q86VH2 1401 aa14.96□□□□□ -0.02
ARFGEF1-201ENST00000262215 KRT18P05783 430 aaKnown RBP14.96□□□□□ -0.02
ARFGEF1-201ENST00000262215 RIPK4P57078 832 aa14.96□□□□□ -0.02
ARFGEF1-201ENST00000262215 PDE3BQ13370 1112 aa14.96□□□□□ -0.02
ARFGEF1-201ENST00000262215 SYCP1Q15431 976 aa14.96□□□□□ -0.02
ARFGEF1-201ENST00000262215 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 NAT10Q9H0A0 1025 aaKnown RBP14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 HMOX1P09601 288 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 CDK5RAP3Q96JB5 506 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 PDCL3Q9H2J4 239 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 NUTM2GQ5VZR2 741 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 INTS3Q68E01 1043 aaKnown RBP14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 RIC3Q7Z5B4 369 aa14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 DNAJC2Q99543 621 aaKnown RBP14.95□□□□□ -0.02
ARFGEF1-201ENST00000262215 CCDC39Q9UFE4 941 aa14.94□□□□□ -0.02
ARFGEF1-201ENST00000262215 ERCC4Q92889 916 aaPredicted RBP14.94□□□□□ -0.02
ARFGEF1-201ENST00000262215 E9PSI1 815 aa14.94□□□□□ -0.02
ARFGEF1-201ENST00000262215 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
ARFGEF1-201ENST00000262215 C22orf23Q9BZE7 217 aa14.94□□□□□ -0.02
ARFGEF1-201ENST00000262215 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
ARFGEF1-201ENST00000262215 MYO6Q9UM54 1294 aa14.93□□□□□ -0.02
ARFGEF1-201ENST00000262215 MAGEC2Q9UBF1 373 aaPredicted RBP14.93□□□□□ -0.02
ARFGEF1-201ENST00000262215 WWC2Q6AWC2 1192 aa14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 PRPF40AO75400 957 aaKnown RBP14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 NUCB2P80303 420 aa14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 DDX19BQ9UMR2 479 aa14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 DDX58O95786 925 aaKnown RBP14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 SEPT11Q9NVA2 429 aaKnown RBP14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 STK3Q13188 491 aa14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 ERICH4A6NGS2 130 aa14.92□□□□□ -0.02
ARFGEF1-201ENST00000262215 ZRSR2Q15696 482 aaKnown RBP14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 TANGO6Q9C0B7 1094 aa14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 TSPYL4Q9UJ04 414 aa14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 FIBPO43427 364 aa14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 MYBBP1AQ9BQG0 1328 aaKnown RBP14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 TAF3Q5VWG9 929 aa14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 PANK1Q8TE04 598 aa14.91□□□□□ -0.02
ARFGEF1-201ENST00000262215 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
ARFGEF1-201ENST00000262215 XBP1P17861 261 aa14.9□□□□□ -0.02
ARFGEF1-201ENST00000262215 SMARCE1Q969G3 411 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 DEF6Q9H4E7 631 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 CCDC66A2RUB6 948 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 KIAA0754O94854 1291 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 SERPINC1P01008 464 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 FILIP1LQ4L180 1135 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 GOLGA6L10A6NI86 522 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 KINO60870 393 aaKnown RBP14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 PSME1Q06323 249 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 CCDC181Q5TID7 509 aa14.89□□□□□ -0.03
ARFGEF1-201ENST00000262215 ERC2O15083 957 aa14.88□□□□□ -0.03
ARFGEF1-201ENST00000262215 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
ARFGEF1-201ENST00000262215 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
ARFGEF1-201ENST00000262215 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 PPM1FP49593 454 aaPredicted RBP14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 TRAK2O60296 914 aa14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 DIAPH1O60610 1272 aaKnown RBP14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 MAP4K4O95819 1239 aaPredicted RBP14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 ERLIN2O94905 339 aa14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
ARFGEF1-201ENST00000262215 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
ARFGEF1-201ENST00000262215 RBM25P49756 843 aaKnown RBP14.86□□□□□ -0.03
ARFGEF1-201ENST00000262215 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
ARFGEF1-201ENST00000262215 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
ARFGEF1-201ENST00000262215 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
ARFGEF1-201ENST00000262215 SSR1P43307 286 aaKnown RBP14.85□□□□□ -0.03
ARFGEF1-201ENST00000262215 API5Q9BZZ5 524 aaKnown RBP14.85□□□□□ -0.03
ARFGEF1-201ENST00000262215 NEK4P51957 841 aa14.85□□□□□ -0.03
ARFGEF1-201ENST00000262215 MRE11P49959 708 aa14.84□□□□□ -0.03
ARFGEF1-201ENST00000262215 STK38Q15208 465 aa14.84□□□□□ -0.03
ARFGEF1-201ENST00000262215 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
ARFGEF1-201ENST00000262215 SSBP05455 408 aaKnown RBP eCLIP14.84□□□□□ -0.03
ARFGEF1-201ENST00000262215 UBTFL1P0CB47 393 aaPredicted RBP14.84□□□□□ -0.03
ARFGEF1-201ENST00000262215 DYDC1Q8WWB3 177 aa14.83□□□□□ -0.04
ARFGEF1-201ENST00000262215 ZNHIT6Q9NWK9 470 aaKnown RBP14.83□□□□□ -0.04
ARFGEF1-201ENST00000262215 GOLGA6L10A0A0M3HER8 536 aa14.83□□□□□ -0.04
ARFGEF1-201ENST00000262215 MATR3P43243 847 aaKnown RBP eCLIP14.83□□□□□ -0.042e-6■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms