RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 SMARCE1Q969G3 411 aa16.63■□□□□ 0.25
TARDBP-201ENST00000240185 DYDC1Q8WWB3 177 aa16.63■□□□□ 0.25
TARDBP-201ENST00000240185 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
TARDBP-201ENST00000240185 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
TARDBP-201ENST00000240185 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
TARDBP-201ENST00000240185 CCDC27Q2M243 656 aa16.63■□□□□ 0.25
TARDBP-201ENST00000240185 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
TARDBP-201ENST00000240185 ZRSR2Q15696 482 aaKnown RBP16.62■□□□□ 0.25
TARDBP-201ENST00000240185 CDC45O75419 566 aa16.62■□□□□ 0.25
TARDBP-201ENST00000240185 ESPNB1AK53 854 aa16.62■□□□□ 0.25
TARDBP-201ENST00000240185 NEFHP12036 1026 aa16.62■□□□□ 0.25
TARDBP-201ENST00000240185 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
TARDBP-201ENST00000240185 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
TARDBP-201ENST00000240185 ERICH2A1L162 156 aa16.61■□□□□ 0.25
TARDBP-201ENST00000240185 ERLIN1O75477 346 aa16.61■□□□□ 0.25
TARDBP-201ENST00000240185 MPNDQ8N594 471 aa16.61■□□□□ 0.25
TARDBP-201ENST00000240185 GRPEL1Q9HAV7 217 aa16.61■□□□□ 0.25
TARDBP-201ENST00000240185 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
TARDBP-201ENST00000240185 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
TARDBP-201ENST00000240185 CCDC43Q96MW1 224 aaKnown RBP16.6■□□□□ 0.25
TARDBP-201ENST00000240185 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
TARDBP-201ENST00000240185 CENPHQ9H3R5 247 aa16.59■□□□□ 0.25
TARDBP-201ENST00000240185 ERLIN2O94905 339 aa16.58■□□□□ 0.25
TARDBP-201ENST00000240185 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.25
TARDBP-201ENST00000240185 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.255e-9■□□□□ 10.1
TARDBP-201ENST00000240185 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.25
TARDBP-201ENST00000240185 FIBPO43427 364 aa16.58■□□□□ 0.24
TARDBP-201ENST00000240185 NOL10Q9BSC4 688 aaKnown RBP16.58■□□□□ 0.24
TARDBP-201ENST00000240185 ROCK1Q13464 1354 aa16.58■□□□□ 0.24
TARDBP-201ENST00000240185 ERC2O15083 957 aa16.57■□□□□ 0.24
TARDBP-201ENST00000240185 GIMAP7Q8NHV1 300 aa16.57■□□□□ 0.24
TARDBP-201ENST00000240185 PDCL2Q8N4E4 241 aa16.57■□□□□ 0.24
TARDBP-201ENST00000240185 WIZO95785 1651 aa16.57■□□□□ 0.24
TARDBP-201ENST00000240185 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
TARDBP-201ENST00000240185 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
TARDBP-201ENST00000240185 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
TARDBP-201ENST00000240185 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
TARDBP-201ENST00000240185 NEK4P51957 841 aa16.56■□□□□ 0.24
TARDBP-201ENST00000240185 TEFQ10587 303 aa16.55■□□□□ 0.24
TARDBP-201ENST00000240185 DHX8Q14562 1220 aaKnown RBP16.55■□□□□ 0.24
TARDBP-201ENST00000240185 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
TARDBP-201ENST00000240185 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
TARDBP-201ENST00000240185 AAMPQ13685 434 aa16.55■□□□□ 0.24
TARDBP-201ENST00000240185 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
TARDBP-201ENST00000240185 ANKRD62A6NC57 917 aa16.55■□□□□ 0.24
TARDBP-201ENST00000240185 PDCP20941 246 aa16.55■□□□□ 0.24
TARDBP-201ENST00000240185 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-201ENST00000240185 SERPINC1P01008 464 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 PSMA5P28066 241 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 FKBP5Q13451 457 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-201ENST00000240185 HSP90AB4PQ58FF6 505 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 TAX1BP1Q86VP1 789 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 PANK1Q8TE04 598 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 CCDC102AQ96A19 550 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 BRMS1Q9HCU9 246 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 TRAK1Q9UPV9 953 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 CTDP1Q9Y5B0 961 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-201ENST00000240185 FAM193AP78312 1265 aa16.54■□□□□ 0.24
TARDBP-201ENST00000240185 CCDC181Q5TID7 509 aa16.53■□□□□ 0.24
TARDBP-201ENST00000240185 NECTIN2Q92692 538 aa16.53■□□□□ 0.24
TARDBP-201ENST00000240185 ZNHIT6Q9NWK9 470 aaKnown RBP16.53■□□□□ 0.24
TARDBP-201ENST00000240185 MCM2P49736 904 aa16.53■□□□□ 0.24
TARDBP-201ENST00000240185 SEPT7Q16181 437 aaKnown RBP16.53■□□□□ 0.24
TARDBP-201ENST00000240185 TRIM34Q9BYJ4 488 aa16.53■□□□□ 0.24
TARDBP-201ENST00000240185 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
TARDBP-201ENST00000240185 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-201ENST00000240185 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
TARDBP-201ENST00000240185 XBP1P17861 261 aa16.52■□□□□ 0.24
TARDBP-201ENST00000240185 RIPK4P57078 832 aa16.52■□□□□ 0.24
TARDBP-201ENST00000240185 RABEP1Q15276 862 aa16.52■□□□□ 0.23
TARDBP-201ENST00000240185 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.23
TARDBP-201ENST00000240185 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
TARDBP-201ENST00000240185 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
TARDBP-201ENST00000240185 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
TARDBP-201ENST00000240185 PPFIBP1Q86W92 1011 aa16.51■□□□□ 0.23
TARDBP-201ENST00000240185 CBX1P83916 185 aa16.51■□□□□ 0.23
TARDBP-201ENST00000240185 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
TARDBP-201ENST00000240185 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-201ENST00000240185 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
TARDBP-201ENST00000240185 ZSCAN30Q86W11 494 aa16.5■□□□□ 0.23
TARDBP-201ENST00000240185 UBXN4Q92575 508 aa16.5■□□□□ 0.23
TARDBP-201ENST00000240185 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
TARDBP-201ENST00000240185 STK38Q15208 465 aa16.49■□□□□ 0.23
TARDBP-201ENST00000240185 TNMDQ9H2S6 317 aa16.49■□□□□ 0.23
TARDBP-201ENST00000240185 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
TARDBP-201ENST00000240185 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.49■□□□□ 0.23
TARDBP-201ENST00000240185 VPS37DQ86XT2 251 aa16.49■□□□□ 0.23
TARDBP-201ENST00000240185 ANKRD18AQ8IVF6 992 aa16.49■□□□□ 0.23
TARDBP-201ENST00000240185 COG3Q96JB2 828 aa16.49■□□□□ 0.23
TARDBP-201ENST00000240185 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
TARDBP-201ENST00000240185 KDM4AO75164 1064 aa16.48■□□□□ 0.23
TARDBP-201ENST00000240185 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
TARDBP-201ENST00000240185 EZRP15311 586 aaKnown RBP16.48■□□□□ 0.23
TARDBP-201ENST00000240185 LUC7LQ9NQ29 371 aaKnown RBP16.48■□□□□ 0.23
TARDBP-201ENST00000240185 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
TARDBP-201ENST00000240185 IBSPP21815 317 aaPredicted RBP16.47■□□□□ 0.23
TARDBP-201ENST00000240185 SOGA1O94964 1423 aa16.47■□□□□ 0.23
TARDBP-201ENST00000240185 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
TARDBP-201ENST00000240185 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms