RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YOL118CQ08259 102 aa1.35□□□□□ -2.19
SDC25YLL016W HMRA2P0CY13 119 aa1.35□□□□□ -2.19
SDC25YLL016W YPR203WQ08994 102 aa1.35□□□□□ -2.19
SDC25YLL016W YOR072WQ08486 104 aa1.34□□□□□ -2.19
SDC25YLL016W COX9P07255 59 aa1.34□□□□□ -2.2
SDC25YLL016W LCL2Q08045 131 aa1.34□□□□□ -2.2
SDC25YLL016W YCR085WP25650 117 aa1.33□□□□□ -2.2
SDC25YLL016W YAR064WP39563 99 aa1.33□□□□□ -2.2
SDC25YLL016W YDR210WQ03482 75 aa1.33□□□□□ -2.2
SDC25YLL016W YGR240C-AQ3E786 66 aa1.33□□□□□ -2.2
SDC25YLL016W POC4Q12245 148 aaPredicted RBP1.33□□□□□ -2.2
SDC25YLL016W YCR095W-AQ3E787 52 aa1.33□□□□□ -2.2
SDC25YLL016W RPS22AP0C0W1 130 aaKnown RBP1.32□□□□□ -2.2
SDC25YLL016W SPC1P46965 94 aa1.32□□□□□ -2.2
SDC25YLL016W YBR013CP38215 129 aa1.32□□□□□ -2.2
SDC25YLL016W MRPS12P53732 153 aa1.32□□□□□ -2.2
SDC25YLL016W RPS11AP0CX47 156 aaKnown RBP1.31□□□□□ -2.2
SDC25YLL016W RPS11BP0CX48 156 aaKnown RBP1.31□□□□□ -2.2
SDC25YLL016W MIC27P50945 234 aa1.31□□□□□ -2.2
SDC25YLL016W TOM6P33448 61 aa1.31□□□□□ -2.2
SDC25YLL016W CWP2P43497 92 aa1.3□□□□□ -2.2
SDC25YLL016W YOR192C-CQ3E736 78 aa1.3□□□□□ -2.2
SDC25YLL016W RPS22BQ3E7Y3 130 aaKnown RBP1.3□□□□□ -2.2
SDC25YLL016W AQY2P0CD90 149 aa1.29□□□□□ -2.2
SDC25YLL016W MRPL31P14063 131 aaPredicted RBP1.29□□□□□ -2.2
SDC25YLL016W MRP17P28778 131 aa1.29□□□□□ -2.2
SDC25YLL016W MRX7P53869 86 aa1.29□□□□□ -2.2
SDC25YLL016W SNA2P56508 79 aa1.29□□□□□ -2.2
SDC25YLL016W MGR2Q02889 113 aa1.29□□□□□ -2.2
SDC25YLL016W YCR001WP25347 104 aa1.29□□□□□ -2.2
SDC25YLL016W PDX3P38075 228 aaKnown RBP1.29□□□□□ -2.2
SDC25YLL016W LCL1Q02786 101 aa1.29□□□□□ -2.2
SDC25YLL016W YPR108W-AQ3E7B3 70 aa1.29□□□□□ -2.2
SDC25YLL016W YIL102CP40488 101 aa1.28□□□□□ -2.2
SDC25YLL016W YPL038W-AQ3E7B4 63 aa1.28□□□□□ -2.2
SDC25YLL016W YOR011W-AQ3E807 68 aa1.28□□□□□ -2.2
SDC25YLL016W YHR213W-AQ8TGT4 77 aa1.28□□□□□ -2.2
SDC25YLL016W YBL071CP38185 102 aa1.27□□□□□ -2.21
SDC25YLL016W SWM2P40342 146 aa1.27□□□□□ -2.21
SDC25YLL016W AIM19P40502 157 aa1.27□□□□□ -2.21
SDC25YLL016W YGL258W-AQ3E740 77 aa1.27□□□□□ -2.21
SDC25YLL016W COX19Q3E731 98 aa1.26□□□□□ -2.21
SDC25YLL016W YOL013W-AP0C272 63 aaPredicted RBP1.26□□□□□ -2.21
SDC25YLL016W NHP2P32495 156 aaPredicted RBP1.26□□□□□ -2.21
SDC25YLL016W YDR034C-AP0C289 58 aa1.26□□□□□ -2.21
SDC25YLL016W TOM7P53507 60 aa1.26□□□□□ -2.21
SDC25YLL016W YPR010C-AA5Z2X5 72 aa1.25□□□□□ -2.21
SDC25YLL016W PAU6P0CE90 120 aa1.25□□□□□ -2.21
SDC25YLL016W PAU18P0CE91 120 aa1.25□□□□□ -2.21
SDC25YLL016W FPR2P32472 135 aa1.25□□□□□ -2.21
SDC25YLL016W YDR119W-AQ2V2P9 66 aa1.25□□□□□ -2.21
SDC25YLL016W YLR255CO13574 117 aa1.24□□□□□ -2.21
SDC25YLL016W YDR381C-AQ3E6R5 114 aa1.24□□□□□ -2.21
SDC25YLL016W HUG1Q6Q5K6 68 aa1.24□□□□□ -2.21
SDC25YLL016W YLR307C-AQ3E825 87 aa1.24□□□□□ -2.21
SDC25YLL016W YBR292CP38357 123 aa1.24□□□□□ -2.21
SDC25YLL016W BSC4P53841 131 aa1.24□□□□□ -2.21
SDC25YLL016W YDR010CQ12426 110 aa1.24□□□□□ -2.21
SDC25YLL016W YPR145C-AQ2V2P0 78 aa1.24□□□□□ -2.21
SDC25YLL016W YNR034W-AQ3E841 98 aa1.24□□□□□ -2.21
SDC25YLL016W ERI1P62651 68 aaKnown RBP1.23□□□□□ -2.21
SDC25YLL016W YKL065W-AQ2V2P2 73 aa1.23□□□□□ -2.21
SDC25YLL016W YLL066W-BQ8TGJ7 56 aa1.23□□□□□ -2.21
SDC25YLL016W HUA1P40325 198 aa1.22□□□□□ -2.21
SDC25YLL016W YMR007WQ03675 126 aa1.22□□□□□ -2.21
SDC25YLL016W YOR314WQ12506 109 aa1.22□□□□□ -2.21
SDC25YLL016W PAU1P0CE88 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU14P0CE89 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU8P0CE92 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU11P0CE93 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU13P38725 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU4P53427 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU10Q03050 120 aa1.21□□□□□ -2.22
SDC25YLL016W PAU9Q3E770 120 aa1.21□□□□□ -2.22
SDC25YLL016W YER188C-AP0C0V2 99 aa1.21□□□□□ -2.22
SDC25YLL016W LSM2P38203 95 aaKnown RBP1.21□□□□□ -2.22
SDC25YLL016W SHU1P38751 150 aa1.21□□□□□ -2.22
SDC25YLL016W MVB12P42939 101 aa1.21□□□□□ -2.22
SDC25YLL016W YJR128WP47162 119 aa1.21□□□□□ -2.22
SDC25YLL016W PAI3P01094 68 aa1.2□□□□□ -2.22
SDC25YLL016W YAL065CO13511 128 aa1.2□□□□□ -2.22
SDC25YLL016W PAU20Q08322 120 aa1.2□□□□□ -2.22
SDC25YLL016W SPI1P40092 148 aa1.19□□□□□ -2.22
SDC25YLL016W YHR213W-BQ8TGK1 99 aa1.19□□□□□ -2.22
SDC25YLL016W YGR121W-AQ3E816 71 aa1.18□□□□□ -2.22
SDC25YLL016W YGR025WP53216 100 aa1.18□□□□□ -2.22
SDC25YLL016W YKL023C-AQ2V2P3 75 aa1.17□□□□□ -2.22
SDC25YLL016W YMR122W-AQ3E842 84 aa1.17□□□□□ -2.22
SDC25YLL016W HHY1P39982 102 aa1.16□□□□□ -2.22
SDC25YLL016W YMR141CP40211 102 aa1.16□□□□□ -2.22
SDC25YLL016W PAU23Q07987 124 aa1.16□□□□□ -2.22
SDC25YLL016W YOR105WQ08504 108 aa1.16□□□□□ -2.22
SDC25YLL016W PAU17Q12370 124 aa1.16□□□□□ -2.22
SDC25YLL016W YNL042W-BQ3E7Z2 85 aa1.15□□□□□ -2.22
SDC25YLL016W YFL041W-AQ3E817 63 aa1.15□□□□□ -2.22
SDC25YLL016W NOP10Q6Q547 58 aaPredicted RBP1.15□□□□□ -2.22
SDC25YLL016W PMP3P87284 55 aa1.15□□□□□ -2.23
SDC25YLL016W YIL156W-BQ2V2P4 73 aa1.15□□□□□ -2.23
SDC25YLL016W QCR9P22289 66 aa1.14□□□□□ -2.23
SDC25YLL016W ATX1P38636 73 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms