RNA–Protein interactions for RNA: ENST00000611640.4

KDM4B-211, Transcript of lysine demethylase 4B, humanhuman

TSL 5 BASIC

Gene KDM4B, Length 5,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-211ENST00000611640 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 ATP11BQ9Y2G3 1177 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 ALDH1A1P00352 501 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 VCAM1P19320 739 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 MTFR1Q15390 333 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 ZKSCAN4Q969J2 545 aaPredicted RBP17.11■□□□□ 0.33
KDM4B-211ENST00000611640 TMEM176AQ96HP8 235 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 ECSITQ9BQ95 431 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
KDM4B-211ENST00000611640 PYGMP11217 842 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 ODC1P11926 461 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 HARS2P49590 506 aaKnown RBP17.11■□□□□ 0.33
KDM4B-211ENST00000611640 ARHGEF7Q14155 803 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 STRA8Q7Z7C7 330 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 DDX53Q86TM3 631 aaKnown RBP17.11■□□□□ 0.33
KDM4B-211ENST00000611640 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 SHOC2Q9UQ13 582 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 VPS9D1Q9Y2B5 631 aa17.11■□□□□ 0.33
KDM4B-211ENST00000611640 TPST1O60507 370 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 WDR47O94967 919 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ACTL9Q8TC94 416 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ATXN2LQ8WWM7 1075 aaKnown RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 TUBGCP3Q96CW5 907 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 DDX3XO00571 662 aaKnown RBP eCLIP17.1■□□□□ 0.331e-35■■■■□ 21.9
KDM4B-211ENST00000611640 NFIBO00712 420 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 OR1G1P47890 313 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 GLRBP48167 497 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 FUT11Q495W5 492 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ZNF786Q8N393 782 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 STX19Q8N4C7 294 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ATP6V0D2Q8N8Y2 350 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 SLC35C1Q96A29 364 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 CINPQ9BW66 212 aaPredicted RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 PCDHA3Q9Y5H8 950 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 EVPLLA8MZ36 301 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 SERPIND1P05546 499 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 CYP2B6P20813 491 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 GRK2P25098 689 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 BCAT1P54687 386 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 SKOR1P84550 965 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 MRNIPQ6NTE8 343 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 DDI1Q8WTU0 396 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 RXFP2Q8WXD0 754 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 APBB2Q92870 758 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ZC4H2Q9NQZ6 224 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 TRMT6Q9UJA5 497 aaKnown RBP17.1■□□□□ 0.33
KDM4B-211ENST00000611640 USP1O94782 785 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 ZCCHC18P0CG32 403 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 SLC2A3P11169 496 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 BMPR2Q13873 1038 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
KDM4B-211ENST00000611640 FAM95CA0A1B0GW59 222 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 DNALI1O14645 258 aaPredicted RBP17.09■□□□□ 0.33
KDM4B-211ENST00000611640 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
KDM4B-211ENST00000611640 PDPK2PQ6A1A2 396 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 CHST12Q9NRB3 414 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 RNF112Q9ULX5 631 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 PXDNQ92626 1479 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 RARAP10276 462 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 CPA3P15088 417 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 SOX10P56693 466 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 UGT3A1Q6NUS8 523 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.339e-8■■■■□ 25.4
KDM4B-211ENST00000611640 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 SEPT3Q9UH03 358 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 IL1R1P14778 569 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 CPT1AP50416 773 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 TBC1D19Q8N5T2 526 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 CPB2Q96IY4 423 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 CYP3A43Q9HB55 503 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 F9P00740 461 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
KDM4B-211ENST00000611640 KLHL4Q9C0H6 718 aa17.09■□□□□ 0.33
KDM4B-211ENST00000611640 E9PBE3 544 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 STX7O15400 261 aaKnown RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 KLHL41O60662 606 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 SLITRK3O94933 977 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 SHMT1P34896 483 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 IFI35P80217 286 aaPredicted RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 P3H2Q8IVL5 708 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 CCDC60Q8IWA6 550 aaPredicted RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 SYTL5Q8TDW5 730 aaPredicted RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 ABI2Q9NYB9 513 aaPredicted RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 SOX13Q9UN79 622 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 FAM86B1E9PN63 330 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 VWA5AO00534 786 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 FAM86B2P0C5J1 330 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 TAL1P17542 331 aaPredicted RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 CLK1P49759 484 aaKnown RBP17.08■□□□□ 0.33
KDM4B-211ENST00000611640 ST8SIA6P61647 398 aa17.08■□□□□ 0.33
KDM4B-211ENST00000611640 TRIM60Q495X7 471 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms