RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IRAK2O43187 625 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF862O60290 1169 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 RAMP2O60895 175 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 SLITRK3O94933 977 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 OR1D2P34982 312 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 RNF187Q5TA31 235 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 SLFN11Q7Z7L1 901 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 CCDC60Q8IWA6 550 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 BADQ92934 168 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 ACO2Q99798 780 aaKnown RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 PDE11AQ9HCR9 933 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 AGPAT5Q9NUQ2 364 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 RSPH14Q9UHP6 348 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 CRYL1Q9Y2S2 319 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 USH1CQ9Y6N9 552 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 A0A0U1RQF3 1178 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 CCNDBP1O95273 360 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 NFICP08651 508 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 GABRR2P28476 465 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 CCND3P30281 292 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 AKT2P31751 481 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 BMPR1AP36894 532 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 COPS2P61201 443 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 NAA20P61599 178 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 DMWDQ09019 674 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 SLC12A1Q13621 1099 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 KLHL38Q2WGJ6 581 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 NAA35Q5VZE5 725 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 TTC19Q6DKK2 380 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 MRNIPQ6NTE8 343 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 PID1Q7Z2X4 250 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 GPR65Q8IYL9 337 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 OXR1Q8N573 874 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 C16orf45Q96MC5 204 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 CNPY3Q9BT09 278 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 CNGB3Q9NQW8 809 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 NDFIP2Q9NV92 336 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 ZDHHC7Q9NXF8 308 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 NCKIPSDQ9NZQ3 722 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 SLC39A10Q9ULF5 831 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 LACTBL1A8MY62 500 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 SMIM24O75264 130 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 TROVE2P10155 538 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 VCPP55072 806 aaKnown RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 YWHAZP63104 245 aaKnown RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 MRPS5P82675 430 aaKnown RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 GTF2BQ00403 316 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 UBLCP1Q8WVY7 318 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 AIFM3Q96NN9 605 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 PAIP2Q9BPZ3 127 aaKnown RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 POPDC2Q9HBU9 364 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 KCNK9Q9NPC2 374 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 DUS2Q9NX74 493 aaKnown RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 PAK5Q9P286 719 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 GPN3Q9UHW5 284 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-212ENST00000591126 STK38LQ9Y2H1 464 aa6.54□□□□□ -1.36
SMAD4-212ENST00000591126 ESRRBO95718 433 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 SOD2P04179 222 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 C8AP07357 584 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 GZMAP12544 262 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 STIP1P31948 543 aaKnown RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 MSH2P43246 934 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ARRB1P49407 418 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 BASP1P80723 227 aaKnown RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FAM187BQ17R55 369 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FASTKD1Q53R41 847 aaKnown RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 GLRA4Q5JXX5 417 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ANKS6Q68DC2 871 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ADSSL1Q8N142 457 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FOXJ1Q92949 421 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 LRRC46Q96FV0 321 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ZBED3Q96IU2 234 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 CFHR5Q9BXR6 569 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 HHATLQ9HCP6 504 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 SELENONQ9NZV5 590 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 TRHDEQ9UKU6 1024 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 CLGNO14967 610 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ITGBL1O95965 494 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 SERPINF2P08697 491 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 SYN1P17600 705 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 CDC25AP30304 524 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 PRCPP42785 496 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 BCL2L1Q07817 233 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 GPAT2Q6NUI2 795 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FAM173BQ6P4H8 233 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 C12orf56Q8IXR9 622 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 CHPFQ8IZ52 775 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FAM174AQ8TBP5 190 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ARMC5Q96C12 935 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 CHMP6Q96FZ7 201 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FEM1CQ96JP0 617 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 FBXL18Q96ME1 805 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ST6GALNAC4Q9H4F1 302 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 SAE1Q9UBE0 346 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-212ENST00000591126 ADGRA3Q8IWK6 1321 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 A0A1W2PQJ5 194 aa6.53□□□□□ -1.36
SMAD4-212ENST00000591126 PER2O15055 1255 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms