RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 POLR2DO15514 142 aaKnown RBP13.79□□□□□ -0.2
SF3B3-202ENST00000562722 CASP1P29466 404 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 EIF2DP41214 584 aaKnown RBP13.79□□□□□ -0.2
SF3B3-202ENST00000562722 GRIA2P42262 883 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 CASP4P49662 377 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 UAP1L1Q3KQV9 507 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 EOGTQ5NDL2 527 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 HECTD3Q5T447 861 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 RHBDF2Q6PJF5 856 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 SHC4Q6S5L8 630 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 TMEM92Q6UXU6 159 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 ARMCX6Q7L4S7 300 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 LPCAT2Q7L5N7 544 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 C12orf40Q86WS4 652 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 KIAA1958Q8N8K9 716 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 RLN3Q8WXF3 142 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF516Q92618 1163 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 KCNK16Q96T55 309 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 SLC39A2Q9NP94 309 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 TMEM30AQ9NV96 361 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 FAM13BQ9NYF5 915 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 CHORDC1Q9UHD1 332 aaPredicted RBP13.79□□□□□ -0.2
SF3B3-202ENST00000562722 HELZP42694 1942 aaKnown RBP13.79□□□□□ -0.2
SF3B3-202ENST00000562722 ANAPC1Q9H1A4 1944 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 EML5Q05BV3 1969 aa13.79□□□□□ -0.2
SF3B3-202ENST00000562722 TCRBV21S2A2A0A5A6 115 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 E2F8A0AVK6 867 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 TBC1D3BA6NDS4 549 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 PATE3B3GLJ2 98 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 SGK1O00141 431 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 COCHO43405 550 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 YEATS4O95619 227 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 STAU1O95793 577 aaKnown RBP13.78□□□□□ -0.2
SF3B3-202ENST00000562722 IRF1P10914 325 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 AFMP43652 599 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 CDH8P55286 799 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 SHC2P98077 582 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 GAD2Q05329 585 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF252P-AS1Q0IIN9 211 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 MESP2Q0VG99 397 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 ANO4Q32M45 955 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
SF3B3-202ENST00000562722 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 LY6G5CQ5SRR4 150 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 SH3PXD2AQ5TCZ1 1133 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 EMC10Q5UCC4 262 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 CNNM4Q6P4Q7 775 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 FAM35AQ86V20 835 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 NAT16Q8N8M0 369 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 IL17RCQ8NAC3 791 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 OVCA2Q8WZ82 227 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 DMAP1Q9NPF5 467 aaPredicted RBP13.78□□□□□ -0.2
SF3B3-202ENST00000562722 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 GMIPQ9P107 970 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 CGNQ9P2M7 1197 aaKnown RBP13.78□□□□□ -0.2
SF3B3-202ENST00000562722 KIAA1549LQ6ZVL6 1849 aa13.78□□□□□ -0.2
SF3B3-202ENST00000562722 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 GIPC1O14908 333 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 AP1G2O75843 785 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.21
SF3B3-202ENST00000562722 TNFRSF4P43489 277 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 ME1P48163 572 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 SLC5A3P53794 718 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 FOXC1Q12948 553 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.21
SF3B3-202ENST00000562722 KNOP1Q1ED39 458 aaKnown RBP13.77□□□□□ -0.21
SF3B3-202ENST00000562722 PREPLQ4J6C6 727 aaPredicted RBP13.77□□□□□ -0.21
SF3B3-202ENST00000562722 NUDT18Q6ZVK8 323 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 TMEFF1Q8IYR6 380 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 SCAMP5Q8TAC9 235 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 GOLGA5Q8TBA6 731 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 OTUB2Q96DC9 234 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 SMARCD1Q96GM5 515 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
SF3B3-202ENST00000562722 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 MYO16Q9Y6X6 1858 aa13.77□□□□□ -0.21
SF3B3-202ENST00000562722 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
SF3B3-202ENST00000562722 P4HA1P13674 534 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 P2RY2P41231 377 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
SF3B3-202ENST00000562722 MAPK8P45983 427 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 AP3M2P53677 418 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 IRX4P78413 519 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 ORC1Q13415 861 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 CUL4BQ13620 913 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 NCOA4Q13772 614 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 BMT2Q1RMZ1 405 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 TRIM61Q5EBN2 209 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 C10orf76Q5T2E6 689 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 TRMT11Q7Z4G4 463 aaKnown RBP13.76□□□□□ -0.21
SF3B3-202ENST00000562722 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
SF3B3-202ENST00000562722 C12orf56Q8IXR9 622 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms