RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 LGALS16A8MUM7 142 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 PRR33A8MZF0 331 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 PIK3R2O00459 728 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 STK25O00506 426 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 XPO1O14980 1071 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 SETSIPP0DME0 302 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 PGFP49763 221 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 RGS7P49802 495 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 PDE6CP51160 858 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 UBXN1Q04323 297 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 IER5LQ5T953 404 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 KLHDC7AQ5VTJ3 777 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 LCLAT1Q6UWP7 414 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 FLCNQ8NFG4 579 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 SHC3Q92529 594 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 SECISBP2LQ93073 1101 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 NACA2Q9H009 215 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 CCSER2Q9H7U1 834 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 ARHGEF3Q9NR81 526 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 TLR8Q9NR97 1041 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 FAM207AQ9NSI2 230 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 SCML2Q9UQR0 700 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 TECTAO75443 2155 aa16.71■□□□□ 0.27
RABGGTA-206ENST00000558649 A0A1W2PQH9 124 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 FAM92AA1XBS5 289 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 KRBA1A5PL33 1030 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 SOBPA7XYQ1 873 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 OAS1P00973 400 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 MBL2P11226 248 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 LCP1P13796 627 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 WEE1P30291 646 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 TKTL1P51854 596 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 KIF11P52732 1056 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 PFKPQ01813 784 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 ADIGQ0VDE8 80 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 IQCB1Q15051 598 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 SYCP1Q15431 976 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 STILQ15468 1287 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 CNGA2Q16280 664 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 HECTD3Q5T447 861 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 TTC8Q8TAM2 541 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 SH3RF2Q8TEC5 729 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 IRF7Q92985 503 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 RNF38Q9H0F5 515 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 KIF9Q9HAQ2 790 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 LRRC4Q9HBW1 653 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 HEBP1Q9NRV9 189 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 THG1LQ9NWX6 298 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 OBP2AQ9NY56 170 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 WNT16Q9UBV4 365 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 NAGPAQ9UK23 515 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 CPQQ9Y646 472 aa16.7■□□□□ 0.26
RABGGTA-206ENST00000558649 FOXN3O00409 490 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 COCHO43405 550 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 MED7O43513 233 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 UCHL3P15374 230 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 PLA2G4AP47712 749 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 TPM4P67936 248 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 FCHO2Q0JRZ9 810 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 ZNF268Q14587 947 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 CC2D1AQ6P1N0 951 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 DENND1BQ6P3S1 775 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 SIX6OS1Q8N1H7 587 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 ULBP1Q9BZM6 244 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 OSER1Q9NX31 292 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 NUDT5Q9UKK9 219 aa16.69■□□□□ 0.26
RABGGTA-206ENST00000558649 SCAMP3O14828 347 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 CHADO15335 359 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 TLR5O60602 858 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 ZDHHC11BP0C7U3 371 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 IRF1P10914 325 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 POLR2FP61218 127 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 PTK2Q05397 1052 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 TNK2Q07912 1038 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 USP4Q13107 963 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 MTF1Q14872 753 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 MLF2Q15773 248 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 ZNF77Q15935 545 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 PKDCCQ504Y2 493 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 ARHGAP29Q52LW3 1261 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 SLC44A4Q53GD3 710 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 RAB41Q5JT25 222 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 TPRG1Q6ZUI0 275 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 CCDC186Q7Z3E2 898 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 SLC47A2Q86VL8 602 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 PASD1Q8IV76 773 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 NEK11Q8NG66 645 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms