RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 ITGA11Q9UKX5 1188 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 RPA3P35244 121 aaPredicted RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 ELK3P41970 407 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 MSH2P43246 934 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 ACTN3Q08043 901 aaPredicted RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 STAT4Q14765 748 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 CROCCP2Q86T23 111 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 LBHD1Q9BQE6 289 aaPredicted RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 SNRNP25Q9BV90 132 aaKnown RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 PITPNM3Q9BZ71 974 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 WDR35Q9P2L0 1181 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 TCRBV5S1A1TA0A578 114 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 CCDC78A2IDD5 438 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 FAM155BO75949 473 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 PGK1P00558 417 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 CRADDP78560 199 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 OASLQ15646 514 aaKnown RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 RNASEH2BQ5TBB1 312 aaKnown RBP16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 PCDH9Q9HC56 1237 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
ATP2C1-224ENST00000533801 MFSD10Q14728 455 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 MAP7D3Q8IWC1 876 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 CCDC63Q8NA47 563 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 BAIAP2L1Q9UHR4 511 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 PTPRFP10586 1907 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 PAPSS1O43252 624 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 STRNO43815 780 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 HUS1O60921 280 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 ZNF143P52747 638 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 CCDC14Q49A88 953 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 FBXO47Q5MNV8 452 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 ARHGEF18Q6ZSZ5 1173 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 PPIL6Q8IXY8 311 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 SLCO2A1Q92959 643 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 TBC1D31Q96DN5 1066 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 LHX5Q9H2C1 402 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 CAPN9O14815 690 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 SPTLC1O15269 473 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 F7P08709 466 aaPredicted RBP16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 AFF1P51825 1210 aaKnown RBP16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 GBE1Q04446 702 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 HIC1Q14526 733 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 SOWAHAQ2M3V2 549 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 CXCL17Q6UXB2 119 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 BBS12Q6ZW61 710 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 TTC17Q96AE7 1141 aa16.61■□□□□ 0.25
ATP2C1-224ENST00000533801 APOL1O14791 398 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 AMPD1P23109 780 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 MORF4L2Q15014 288 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 E2F5Q15329 346 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 APPL2Q8NEU8 664 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 SLC13A1Q9BZW2 595 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 RSAD1Q9HA92 442 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 CASTOR2A6NHX0 329 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 FGFR1P11362 822 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 YY1P25490 414 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 NDUFV1P49821 464 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 PITX1P78337 314 aaPredicted RBP16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 ENPEPQ07075 957 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 ADIGQ0VDE8 80 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 BMPR2Q13873 1038 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 LRRC38Q5VT99 294 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 CCHCR1Q8TD31 782 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 ZNF317Q96PQ6 595 aaPredicted RBP16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 PAFAH2Q99487 392 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 CYP3A43Q9HB55 503 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 TRIM33Q9UPN9 1127 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 NME7Q9Y5B8 376 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 SMIM28A0A1B0GU29 152 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 CCDC195A0A1B0GUA6 201 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 FAM47DPA6NHR8 397 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 C2CD4BA6NLJ0 364 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 KBTBD13C9JR72 458 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 ATICP31939 592 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 SCTRP47872 440 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 IL9RQ01113 521 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 SOX4Q06945 474 aaPredicted RBP16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 ZNF449Q6P9G9 518 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 IGDCC3Q8IVU1 814 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 TTC13Q8NBP0 860 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 SLC35B2Q8TB61 432 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 AGAP3Q96P47 875 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 PGLYRP2Q96PD5 576 aa16.6■□□□□ 0.25
ATP2C1-224ENST00000533801 KPNA7A9QM74 516 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 TNPO2O14787 897 aaKnown RBP16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 UBOX5O94941 541 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 LVRNQ6Q4G3 990 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 LRRC8CQ8TDW0 803 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 IL1RAPL1Q9NZN1 696 aa16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 LAMA2P24043 3122 aaKnown RBP16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 C3orf70A6NLC5 250 aaPredicted RBP16.59■□□□□ 0.25
ATP2C1-224ENST00000533801 ITGAVP06756 1048 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms