RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ATP6V0BQ99437 205 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 CITED2Q99967 270 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 SPXQ9BT56 116 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 DCLK3Q9C098 648 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 KLHL25Q9H0H3 589 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 OR51B5Q9H339 312 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 MVB12BQ9H7P6 319 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 LZTFL1Q9NQ48 299 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 PDLIM7Q9NR12 457 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 INTS9Q9NV88 658 aaKnown RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 INTS7Q9NVH2 962 aaKnown RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 STX18Q9P2W9 335 aaKnown RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 TBC1D29Q9UFV1 150 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 PCOLCE2Q9UKZ9 415 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ARHGAP26Q9UNA1 814 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ANKRD6Q9Y2G4 727 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ACEP12821 1306 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 UBN2Q6ZU65 1347 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 A0A1W2PPH5 198 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 A0A1W2PPL8 197 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 A0A1W2PPW3 197 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 LCHNA4D1U4 455 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 VWA3AA6NCI4 1184 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 USP17L5A8MUK1 530 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 GSG1L2A8MUP6 293 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 H0YIN7 160 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PSMD11O00231 422 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PIK3CDO00329 1044 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 GABRDO14764 452 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 KCNN4O15554 427 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 NDUFA2O43678 99 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 SNAPINO95295 136 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 LRG1P02750 347 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 ASLP04424 464 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 ADRB2P07550 413 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 SLC10A3P09131 477 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PF4V1P10720 104 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 KRT3P12035 628 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PRG2P13727 222 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 SLC9A1P19634 815 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 RRM2P31350 389 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 RFC2P35250 354 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 RFC1P35251 1148 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 AFMP43652 599 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 KCNJ5P48544 419 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 YBEYP58557 167 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 RPP30P78346 268 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 RBP5P82980 135 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PPP2R2BQ00005 443 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 TNFAIP2Q03169 654 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 TAP1Q03518 808 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 DNM1Q05193 864 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 DPYDQ12882 1025 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 DUSP4Q13115 394 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 GTF2H3Q13889 308 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 KCNAB1Q14722 419 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 MED1Q15648 1581 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 SMAD1Q15797 465 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 BCORL1Q5H9F3 1711 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 THEM4Q5T1C6 240 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 STXBP5Q5T5C0 1151 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 CCNJQ5T5M9 372 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 C6orf183Q5T699 404 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PPP1R26Q5T8A7 1209 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 NAA35Q5VZE5 725 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 METTL21CQ5VZV1 264 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 JMJD6Q6NYC1 403 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 MIB1Q86YT6 1006 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 ZDHHC17Q8IUH5 632 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 KSR1Q8IVT5 923 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 MAPKAPK5Q8IW41 473 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 SCUBE1Q8IWY4 988 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PHC2Q8IXK0 858 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 CELF2-AS1Q8N7Q2 184 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 OR9A1PQ8NGU1 263 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 CCDC12Q8WUD4 166 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 AFG1LQ8WV93 481 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 LEO1Q8WVC0 666 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 METTL21AQ8WXB1 218 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 LRRC59Q96AG4 307 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 SHDQ96IW2 340 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 VCPIP1Q96JH7 1222 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 MED15Q96RN5 788 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 LMF1Q96S06 567 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PKP4Q99569 1192 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 NUP85Q9BW27 656 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 OSBPL1AQ9BXW6 950 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 RHBGQ9H310 441 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 SP140LQ9H930 580 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 ZBTB40Q9NUA8 1239 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 FAIMQ9NVQ4 179 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 ABI2Q9NYB9 513 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 DTLQ9NZJ0 730 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 ZSWIM5Q9P217 1185 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 CFAP97Q9P2B7 532 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 ORC3Q9UBD5 711 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 STK17AQ9UEE5 414 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms