RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 A0A1W2PRX2 142 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 H0Y3Z8 333 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 DCLK1O15075 740 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 DNPH1O43598 174 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 ZNF500O60304 480 aaPredicted RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 PIAS2O75928 621 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 ITGB1P05556 798 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 PRKCBP05771 671 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 JUPP14923 745 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 SLC6A2P23975 617 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 LRPAP1P30533 357 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 AARSP49588 968 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 TUBP50607 506 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 SEC24CP53992 1094 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 BCAT1P54687 386 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 LOXL3P58215 753 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 KRT17Q04695 432 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 PIGFQ07326 219 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 MAPK7Q13164 816 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 ATP1A4Q13733 1029 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 RRP1BQ14684 758 aaKnown RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 FAM214AQ32MH5 1076 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 TRIM60Q495X7 471 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 MAP3K21Q5TCX8 1036 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 CACHD1Q5VU97 1274 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 BBS12Q6ZW61 710 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 FAM83AQ86UY5 434 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 RASGRP3Q8IV61 690 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 DNAJC10Q8IXB1 793 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 GSPT2Q8IYD1 628 aaKnown RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 ANKRD35Q8N283 1001 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 TSPYL6Q8N831 410 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 NUP133Q8WUM0 1156 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 LARP4BQ92615 738 aaKnown RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 CENPIQ92674 756 aaPredicted RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 ZNF668Q96K58 619 aaPredicted RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 COG8Q96MW5 612 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 MED15Q96RN5 788 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 SMOQ99835 787 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 LSM14BQ9BX40 385 aaKnown RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 SLC25A32Q9H2D1 315 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 AGO3Q9H9G7 860 aaKnown RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 SLC2A4RGQ9NR83 387 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 MRPS18AQ9NVS2 196 aaKnown RBP5.15□□□□□ -1.59
VPS13A-211ENST00000484581 TMOD4Q9NZQ9 345 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 CEP72Q9P209 647 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 SLC45A1Q9Y2W3 748 aa5.15□□□□□ -1.59
VPS13A-211ENST00000484581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 PRR5-ARHGAP8B1AHC4 643 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 K7ENM7 598 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 POLRMTO00411 1230 aaKnown RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 CCNT2O60583 730 aaKnown RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 VIPP01282 170 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ANXA6P08133 673 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ARP10275 920 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ATP1A3P13637 1013 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 MCM2P49736 904 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TOB1P50616 345 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 CCR5P51681 352 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 NR1H2P55055 460 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 NANOS3P60323 173 aaKnown RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 CHRNDQ07001 517 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 SLFN5Q08AF3 891 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 GPS1Q13098 491 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 SLC12A1Q13621 1099 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 BOP1Q14137 746 aaKnown RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 KCNAB1Q14722 419 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TTC22Q5TAA0 569 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 MANEALQ5VSG8 457 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ZNF280DQ6N043 979 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 MFSD5Q6N075 450 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 NFRKBQ6P4R8 1299 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 DRICH1Q6PGQ1 229 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 BRINP3Q76B58 766 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ZNF575Q86XF7 245 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 XYLT1Q86Y38 959 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 LDLRAD3Q86YD5 345 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 CFAP52Q8N1V2 620 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 CPT1CQ8TCG5 803 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ERP27Q96DN0 273 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ZNF512Q96ME7 567 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TRAPPC9Q96Q05 1148 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TWNKQ96RR1 684 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TLR10Q9BXR5 811 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TTYH3Q9C0H2 523 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ZCWPW1Q9H0M4 648 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 TAF1DQ9H5J8 278 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 G6PC2Q9NQR9 355 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 PI4KBQ9UBF8 816 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 POLG2Q9UHN1 485 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 ASAP1Q9ULH1 1129 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 C19orf53Q9UNZ5 99 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-211ENST00000484581 HDAC5Q9UQL6 1122 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 HPSEQ9Y251 543 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 AFG3L2Q9Y4W6 797 aa5.14□□□□□ -1.59
VPS13A-211ENST00000484581 A6NCN8 305 aa5.13□□□□□ -1.59
VPS13A-211ENST00000484581 FIBPO43427 364 aa5.13□□□□□ -1.59
VPS13A-211ENST00000484581 RAMP2O60895 175 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms