RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 DNAJC14Q6Y2X3 702 aaPredicted RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 ACTRT1Q8TDG2 376 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 DIS3LQ8TF46 1054 aaKnown RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 HERVK_113Q902F9 699 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 ZNF689Q96CS4 500 aaPredicted RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 GPR88Q9GZN0 384 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 TMEM165Q9HC07 324 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 M0QZQ0 153 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 PTGESO14684 152 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 PQBP1O60828 265 aaKnown RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 GCLMP48507 274 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 PDE6CP51160 858 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 MGAT5Q09328 741 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 TMEM62Q0P6H9 643 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 ELAVL2Q12926 359 aaKnown RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 CNGA2Q16280 664 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 GLB1LQ6UWU2 654 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 RTN4RL1Q86UN2 441 aaPredicted RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 GSTCDQ8NEC7 633 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 ZSWIM2Q8NEG5 633 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 FBF1Q8TES7 1133 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 PTPRN2Q92932 1015 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 SLC9A7Q96T83 725 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 NSRP1Q9H0G5 558 aaKnown RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
EWSR1-217ENST00000483415 RWDD3Q9Y3V2 267 aa11.32□□□□□ -0.6
EWSR1-217ENST00000483415 NFICP08651 508 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 PTDSS1P48651 473 aaKnown RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 TAF6P49848 677 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 NOP14P78316 857 aaKnown RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 IFI35P80217 286 aaPredicted RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 KCTD19Q17RG1 926 aaPredicted RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 LCA5Q86VQ0 697 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 TRIM42Q8IWZ5 723 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 DNAJC9Q8WXX5 260 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 ZNF518BQ9C0D4 1074 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 MTIF3Q9H2K0 278 aaKnown RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 LUC7LQ9NQ29 371 aaKnown RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 DNAJC12Q9UKB3 198 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 TMCO1Q9UM00 188 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 ATP6V1G1O75348 118 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 UNC5CO95185 931 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 CTSHP09668 335 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 ACO1P21399 889 aaKnown RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 LRRC43Q8N309 656 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 OR5B17Q8NGF7 314 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 VWCEQ96DN2 955 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 SELENOSQ9BQE4 189 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 VCXQ9H320 206 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 MMRN2Q9H8L6 949 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 GALNT8Q9NY28 637 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 PCDHB7Q9Y5E2 793 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 GMEB1Q9Y692 573 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 PLXNA3P51805 1871 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 ARL5CA6NH57 179 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 LSM8O95777 96 aaKnown RBP11.31□□□□□ -0.6
EWSR1-217ENST00000483415 SLC9A1P19634 815 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 DNA2P51530 1060 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 WNT7BP56706 349 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 ZNF699Q32M78 642 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 VPS36Q86VN1 386 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 HOOK3Q86VS8 718 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
EWSR1-217ENST00000483415 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
EWSR1-217ENST00000483415 SYN3O14994 580 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 GZMAP12544 262 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 GSTT1P30711 240 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 ASPAP45381 313 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
EWSR1-217ENST00000483415 CCDC15Q0P6D6 951 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 ASIC2Q16515 512 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 IRF2BP2Q7Z5L9 587 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
EWSR1-217ENST00000483415 GATA6Q92908 595 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 PCMTD1Q96MG8 357 aaPredicted RBP11.3□□□□□ -0.6
EWSR1-217ENST00000483415 SAMD11Q96NU1 681 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 CASD1Q96PB1 797 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 MTMR12Q9C0I1 747 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 FAM192AQ9GZU8 254 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 ATP11BQ9Y2G3 1177 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 TRIM43BA6NCK2 446 aa11.3□□□□□ -0.6
EWSR1-217ENST00000483415 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms