RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 DDX18Q9NVP1 670 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 CEP290O15078 2479 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 RASGRF2O14827 1237 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 OPHN1O60890 802 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 STK10O94804 968 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 GARTP22102 1010 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 ARSEP51690 589 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 ZNF157P51786 506 aaPredicted RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 HPCAP84074 193 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 GSTM4Q03013 218 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 KLC3Q6P597 504 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 PPFIBP2Q8ND30 876 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 ERAP1Q9NZ08 941 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 KIAA0100Q14667 2235 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 ATP9BO43861 1147 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 PDE5AO76074 875 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 COG7P83436 770 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 TAF1CQ15572 869 aaPredicted RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 VSIG1Q86XK7 387 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 PEX5LQ8IYB4 626 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP11-206ENST00000469080 ACTRT1Q8TDG2 376 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 CASP10Q92851 521 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 HERPUD2Q9BSE4 406 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 ABT1Q9ULW3 272 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 MCM3APO60318 1980 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 DLEC1Q9Y238 1755 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 PHF2O75151 1096 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 SUN1O94901 812 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 LGALS2P05162 132 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 CHKAP35790 457 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 IER5Q5VY09 327 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 IZUMO3Q5VZ72 239 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 FASTKD5Q7L8L6 764 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 SCUBE3Q8IX30 993 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 JOSD2Q8TAC2 188 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 HPDLQ96IR7 371 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 TIPINQ9BVW5 301 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 DHX33Q9H6R0 707 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 MRPL47Q9HD33 250 aaKnown RBP12.85□□□□□ -0.35
USP11-206ENST00000469080 ARHGEF3Q9NR81 526 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 CLIC5Q9NZA1 410 aa12.85□□□□□ -0.35
USP11-206ENST00000469080 MIF4GDA9UHW6 222 aaKnown RBP12.84□□□□□ -0.35
USP11-206ENST00000469080 CST8O60676 142 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 PEX11AO75192 247 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 ENTPD5O75356 428 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 CREB1P16220 341 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 HALP42357 657 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 TMED10P49755 219 aaKnown RBP12.84□□□□□ -0.35
USP11-206ENST00000469080 SH3D19Q5HYK7 790 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 DPY19L2P1Q6NXN4 242 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 C4orf33Q8N1A6 199 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 DNERQ8NFT8 737 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 B3GNT5Q9BYG0 378 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 CDT1Q9H211 546 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 CXCL16Q9H2A7 254 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
USP11-206ENST00000469080 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 A8MXQ7 604 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 ASAP2O43150 1006 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 RTP1P59025 263 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 NSUN2Q08J23 767 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP11-206ENST00000469080 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 CUL1Q13616 776 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
USP11-206ENST00000469080 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 ZNF354CQ86Y25 554 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP11-206ENST00000469080 ZBED8Q8IZ13 594 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
USP11-206ENST00000469080 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
USP11-206ENST00000469080 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 HSFX1Q9UBD0 423 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 ARFGEF1Q9Y6D6 1849 aa12.84□□□□□ -0.35
USP11-206ENST00000469080 A0A0B4J269 797 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 I3L4J1 428 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 VAV1P15498 845 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 CDH6P55285 790 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 LIN52Q52LA3 116 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 ZNF362Q5T0B9 420 aaPredicted RBP12.83□□□□□ -0.35
USP11-206ENST00000469080 TMEM214Q6NUQ4 689 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms