RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KRT3P12035 628 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 ATF6P18850 670 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 KLRC2P26717 231 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 SLC5A3P53794 718 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 RPL7AP62424 266 aaKnown RBP22.16■■□□□ 1.14
VPS13B-204ENST00000441350 MRPS5P82675 430 aaKnown RBP22.16■■□□□ 1.14
VPS13B-204ENST00000441350 IFI16Q16666 785 aaKnown RBP22.16■■□□□ 1.14
VPS13B-204ENST00000441350 LRIT3Q3SXY7 679 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 FAM102AQ5T9C2 384 aaPredicted RBP22.16■■□□□ 1.14
VPS13B-204ENST00000441350 SCAMP5Q8TAC9 235 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 SELENOOQ9BVL4 669 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 TMEM59LQ9UK28 342 aa22.16■■□□□ 1.14
VPS13B-204ENST00000441350 ATG2AQ2TAZ0 1938 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 GREB1Q4ZG55 1949 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 MYO7AQ13402 2215 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 ZBED1O96006 694 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 ELF1P32519 619 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 NAP1L1P55209 391 aaKnown RBP22.15■■□□□ 1.14
VPS13B-204ENST00000441350 DAOAP59103 153 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 SLC26A9Q7LBE3 791 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 GDPD5Q8WTR4 605 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 NDRG1Q92597 394 aaKnown RBP22.15■■□□□ 1.14
VPS13B-204ENST00000441350 TRIM7Q9C029 511 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 METTL5Q9NRN9 209 aaKnown RBP22.15■■□□□ 1.14
VPS13B-204ENST00000441350 FBXW11Q9UKB1 542 aa22.15■■□□□ 1.14
VPS13B-204ENST00000441350 GRID2IPA4D2P6 1211 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 PRRG1O14668 218 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 USP17L7P0C7H9 530 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 RFC1P35251 1148 aaPredicted RBP22.14■■□□□ 1.14
VPS13B-204ENST00000441350 TAF5Q15542 800 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 DENND5BQ6ZUT9 1274 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 ARCQ7LC44 396 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 BHLHA9Q7RTU4 235 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 LRRC57Q8N9N7 239 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 JOSD2Q8TAC2 188 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 IRGQQ8WZA9 623 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 MCEEQ96PE7 176 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 ANAPC7Q9UJX3 599 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 YIPF1Q9Y548 306 aa22.14■■□□□ 1.14
VPS13B-204ENST00000441350 SART1O43290 800 aaKnown RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 BUB1BO60566 1050 aaPredicted RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 GLUD1P00367 558 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 SPATA31D3P0C874 917 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 CLCN4P51793 760 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 EFHC1Q5JVL4 640 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 DCUN1D2Q6PH85 259 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 SPATA31D4Q6ZUB0 917 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 GPR152Q8TDT2 470 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 ASNSD1Q9NWL6 643 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 COMMD8Q9NX08 183 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 INSL5Q9Y5Q6 135 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 MTCL1Q9Y4B5 1905 aaKnown RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 COL4A4P53420 1690 aaPredicted RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 FAM92AA1XBS5 289 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 CLASP2O75122 1294 aaKnown RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 RTN3O95197 1032 aaPredicted RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 GLI1P08151 1106 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 USP46P62068 366 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 ZNF569Q5MCW4 686 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 SLFN11Q7Z7L1 901 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 STKLD1Q8NE28 680 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 TRIM58Q8NG06 486 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 BTBD6Q96KE9 485 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 C16orf45Q96MC5 204 aaPredicted RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 FBXO44Q9H4M3 255 aa22.13■■□□□ 1.13
VPS13B-204ENST00000441350 COLQQ9Y215 455 aaPredicted RBP22.13■■□□□ 1.13
VPS13B-204ENST00000441350 ZNF638Q14966 1978 aaKnown RBP22.12■■□□□ 1.13
VPS13B-204ENST00000441350 SLC38A8A6NNN8 435 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 YJEFN3A6XGL0 299 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 E7ENQ6 273 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 MYO1FO00160 1098 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 HSF2BPO75031 334 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 PALMO75781 387 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 ALDH1A3P47895 512 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 GNG11P61952 73 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 ETF1P62495 437 aaKnown RBP22.12■■□□□ 1.13
VPS13B-204ENST00000441350 OGDHQ02218 1023 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 TRNP1Q6NT89 227 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 KREMEN2Q8NCW0 462 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 FNIP1Q8TF40 1166 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 GIPC2Q8TF65 315 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 SLC22A17Q8WUG5 538 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 TTLL2Q9BWV7 592 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 SCML2Q9UQR0 700 aa22.12■■□□□ 1.13
VPS13B-204ENST00000441350 C2CD4BA6NLJ0 364 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 GRAP2O75791 330 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 FLT3P36888 993 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 RNASE9P60153 205 aaKnown RBP22.11■■□□□ 1.13
VPS13B-204ENST00000441350 YWHAZP63104 245 aaKnown RBP22.11■■□□□ 1.13
VPS13B-204ENST00000441350 ZNF252P-AS1Q0IIN9 211 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 MTMR3Q13615 1198 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 C11orf63Q6NUN7 778 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 HFE2Q6ZVN8 426 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 SLC35F6Q8N357 371 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 EMC1Q8N766 993 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 ALS2CR12Q96Q35 445 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 WDR24Q96S15 920 aa22.11■■□□□ 1.13
VPS13B-204ENST00000441350 RFXAPO00287 272 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 TWF1Q12792 350 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 MESDQ14696 234 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms