RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 SNX25Q9H3E2 840 aa14.09□□□□□ -0.15
CHEK2-216ENST00000439200 HSPBP1Q9NZL4 362 aa14.09□□□□□ -0.15
CHEK2-216ENST00000439200 EHD2Q9NZN4 543 aa14.09□□□□□ -0.15
CHEK2-216ENST00000439200 SPAARA0A1B0GVQ0 90 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 TMEM8BA6NDV4 472 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 SRRM3A6NNA2 597 aaPredicted RBP14.08□□□□□ -0.16
CHEK2-216ENST00000439200 CLDN5O00501 218 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 CFIP05156 583 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 ITPKAP23677 461 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 GNL1P36915 607 aaPredicted RBP14.08□□□□□ -0.16
CHEK2-216ENST00000439200 GRIA2P42262 883 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 PPP3CCP48454 512 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 HSF5Q4G112 596 aaPredicted RBP14.08□□□□□ -0.16
CHEK2-216ENST00000439200 LY6G5CQ5SRR4 150 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 TDRD10Q5VZ19 366 aaKnown RBP14.08□□□□□ -0.16
CHEK2-216ENST00000439200 LYSMD4Q5XG99 296 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 TRAPPC11Q7Z392 1133 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 PHTF2Q8N3S3 785 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 DEFB119Q8N690 84 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 KIAA1958Q8N8K9 716 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 NAT16Q8N8M0 369 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 OR6B3Q8NGW1 331 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 ZCCHC14Q8WYQ9 949 aaKnown RBP14.08□□□□□ -0.16
CHEK2-216ENST00000439200 SLITRK1Q96PX8 696 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 SLC32A1Q9H598 525 aa14.08□□□□□ -0.16
CHEK2-216ENST00000439200 ASCC3Q8N3C0 2202 aaKnown RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 KIAA0391O15091 583 aaKnown RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 CST3P01034 146 aaPredicted RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 DLATP10515 647 aaKnown RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 PTPN1P18031 435 aaKnown RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 HOXD13P35453 343 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 TNFRSF4P43489 277 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 SURF1Q15526 300 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 SLC23A3Q6PIS1 610 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 DDX42Q86XP3 938 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 GTPBP2Q9BX10 602 aaKnown RBP14.07□□□□□ -0.16
CHEK2-216ENST00000439200 B3GNT5Q9BYG0 378 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 ELOVL4Q9GZR5 314 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 PILRBQ9UKJ0 227 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 KLK13Q9UKR3 277 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 PLXND1Q9Y4D7 1925 aa14.07□□□□□ -0.16
CHEK2-216ENST00000439200 A0A0A0MRY4 1105 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 COCHO43405 550 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 TACC1O75410 805 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 WASP42768 502 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 TNNC1P63316 161 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 SIM1P81133 766 aaPredicted RBP14.06□□□□□ -0.16
CHEK2-216ENST00000439200 RPL6Q02878 288 aaKnown RBP14.06□□□□□ -0.16
CHEK2-216ENST00000439200 BYSLQ13895 437 aaKnown RBP14.06□□□□□ -0.16
CHEK2-216ENST00000439200 WDR72Q3MJ13 1102 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 PEAR1Q5VY43 1037 aaPredicted RBP14.06□□□□□ -0.16
CHEK2-216ENST00000439200 PIP4P1Q86T03 277 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 ETFBKMTQ8IXQ9 262 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 CCDC65Q8IXS2 484 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 PDILTQ8N807 584 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
CHEK2-216ENST00000439200 RDH13Q8NBN7 331 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 FBXO32Q969P5 355 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 ERLEC1Q96DZ1 483 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 NEUROG3Q9Y4Z2 214 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 MYOFQ9NZM1 2061 aa14.06□□□□□ -0.16
CHEK2-216ENST00000439200 E2F8A0AVK6 867 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 TBC1D3BA6NDS4 549 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 A8MXQ7 604 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 TRIM24O15164 1050 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 AP5Z1O43299 807 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 TULP3O75386 442 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 IRF1P10914 325 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 GABRG2P18507 467 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 TNNI1P19237 187 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 YWHAQP27348 245 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 CYP2J2P51589 502 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
CHEK2-216ENST00000439200 FAM193AP78312 1265 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 GAD2Q05329 585 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 SEMA3BQ13214 749 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 SNRNP35Q16560 246 aaKnown RBP14.05□□□□□ -0.16
CHEK2-216ENST00000439200 SPDYCQ5MJ68 293 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 BTBD8Q5XKL5 378 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 STXBP4Q6ZWJ1 553 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 MIB1Q86YT6 1006 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 BBS7Q8IWZ6 715 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 NUP93Q8N1F7 819 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 PDZD8Q8NEN9 1154 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 OR2I1PQ8NGU4 316 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 SCAMP5Q8TAC9 235 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 WBP2Q969T9 261 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 CCDC127Q96BQ5 260 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 KCNK16Q96T55 309 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 CGRRF1Q99675 332 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 CCSER2Q9H7U1 834 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 CALCOCO1Q9P1Z2 691 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 TBC1D14Q9P2M4 693 aa14.05□□□□□ -0.16
CHEK2-216ENST00000439200 NXF1Q9UBU9 619 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms