RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 IRF6O14896 467 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 FARP2O94887 1054 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 RPL9P32969 192 aaKnown RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 GEMP55040 296 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 MGAT5BQ3V5L5 792 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 C10orf120Q5SQS8 335 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 TATDN2Q93075 761 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SEC16BQ96JE7 1060 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 LRRC40Q9H9A6 602 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 PYGLP06737 847 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SATB1Q01826 763 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 AARS2Q5JTZ9 985 aaKnown RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ITIH5Q86UX2 942 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 DCLK2Q8N568 766 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SEPT8Q92599 483 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 NIFKQ9BYG3 293 aaKnown RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 KDM4CQ9H3R0 1056 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 KLK14Q9P0G3 267 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SCOCQ9UIL1 159 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 RAP1GAPP47736 663 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 TRPM8Q7Z2W7 1104 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 UNC45BQ8IWX7 931 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 FAR2Q96K12 515 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SPON2Q9BUD6 331 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 DMAP1Q9NPF5 467 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 ABI2Q9NYB9 513 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SMARCAL1Q9NZC9 954 aa11.97□□□□□ -0.49
PTCH1-208ENST00000430669 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 YDJCA8MPS7 323 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 NDUFS3O75489 264 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 OXCT1P55809 520 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 POU5F1BQ06416 359 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 ECM1Q16610 540 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 EPC2Q52LR7 807 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 ZNF280DQ6N043 979 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 LZTR1Q8N653 840 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 STAMBPL1Q96FJ0 436 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 DCUN1D1Q96GG9 259 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 TRPC7Q9HCX4 862 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 SLC45A1Q9Y2W3 748 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 ATP9BO43861 1147 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 ATP5BP06576 529 aaKnown RBP11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CDK16Q00536 496 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CCDC15Q0P6D6 951 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 PTGISQ16647 500 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 FAM83EQ2M2I3 478 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 AGGF1Q8N302 714 aaeCLIP11.96□□□□□ -0.49
PTCH1-208ENST00000430669 PHACTR1Q9C0D0 580 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 ZNF638Q14966 1978 aaKnown RBP11.96□□□□□ -0.49
PTCH1-208ENST00000430669 F5H5T6 163 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 KRT4P19013 534 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 RGS4P49798 205 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 RBBP7Q16576 425 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 WDR59Q6PJI9 974 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 TRPM4Q8TD43 1214 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 TMEM169Q96HH4 297 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 MBOAT7Q96N66 472 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-208ENST00000430669 MANSC1Q9H8J5 431 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CHMP2BQ9UQN3 213 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 OPLAHO14841 1288 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CHUKO15111 745 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 KITP10721 976 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CYP2C18P33260 490 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 OTUD4Q01804 1114 aaKnown RBP11.96□□□□□ -0.49
PTCH1-208ENST00000430669 KCNMA1Q12791 1236 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 IL31Q6EBC2 164 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 POLNQ7Z5Q5 900 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-208ENST00000430669 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 FBXO32Q969P5 355 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CPA4Q9UI42 421 aa11.96□□□□□ -0.49
PTCH1-208ENST00000430669 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 C2orf81A6NN90 581 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 GNGT2O14610 69 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 EPHB2P29323 1055 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 DRG2P55039 364 aaKnown RBP11.96□□□□□ -0.5
PTCH1-208ENST00000430669 STX3Q13277 289 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 AMHR2Q16671 573 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 GLRA4Q5JXX5 417 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 APBA2Q99767 749 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 CENPKQ9BS16 269 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 TRHDEQ9UKU6 1024 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 A0A0G2JLL6 359 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-208ENST00000430669 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.5
PTCH1-208ENST00000430669 ESRRGP62508 458 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 PRRT2Q7Z6L0 340 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-208ENST00000430669 PHF13Q86YI8 300 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-208ENST00000430669 DNAJB3Q8WWF6 145 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 CINPQ9BW66 212 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-208ENST00000430669 DPP7Q9UHL4 492 aa11.96□□□□□ -0.5
PTCH1-208ENST00000430669 DCTN4Q9UJW0 460 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms