RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 UBOX5O94941 541 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ALDH2P05091 517 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 APOA4P06727 396 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CKMP06732 381 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SRGAP2CP0DJJ0 459 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 KCNA2P16389 499 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 PDCP20941 246 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 HOXC12P31275 282 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ICAM3P32942 547 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 KRT2P35908 639 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ATP6V1E1P36543 226 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MAN2A2P49641 1150 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CPT1AP50416 773 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SLC8A3P57103 927 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 TLE2Q04725 743 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 GALNT1Q10472 559 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ITGB3BPQ13352 177 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 LBRQ14739 615 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SNX17Q15036 470 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 PGS1Q32NB8 556 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CEP55Q53EZ4 464 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 FAM47CQ5HY64 1035 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CELF3Q5SZQ8 465 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SLC35F1Q5T1Q4 408 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 TTC19Q6DKK2 380 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SLC39A5Q6ZMH5 540 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 PIK3AP1Q6ZUJ8 805 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MILR1Q7Z6M3 343 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 NLRX1Q86UT6 975 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 TTC30AQ86WT1 665 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 VSIG1Q86XK7 387 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 PLA2G4DQ86XP0 818 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 DIS3L2Q8IYB7 885 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CEP57L1Q8IYX8 460 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MICALL1Q8N3F8 863 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 TEX9Q8N6V9 391 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MAB21L3Q8N8X9 362 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 PCSK9Q8NBP7 692 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 DAGLBQ8NCG7 672 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 BICD2Q8TD16 824 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MAGEC3Q8TD91 643 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MGARPQ8TDB4 240 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 WASF1Q92558 559 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 KAT2BQ92831 832 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 TNFRSF25Q93038 417 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SMARCE1Q969G3 411 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 LENG9Q96B70 501 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 RCC1LQ96I51 464 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 C8orf76Q96K31 380 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CCDC140Q96MF4 163 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 GLT1D1Q96MS3 346 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 POP1Q99575 1024 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ADPGKQ9BRR6 497 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 SORBS1Q9BX66 1292 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CELF4Q9BZC1 486 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 BTBD1Q9H0C5 482 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 GLT8D2Q9H1C3 349 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 NKX2-4Q9H2Z4 354 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 KCNF1Q9H3M0 494 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MS4A5Q9H3V2 200 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 L2HGDHQ9H9P8 463 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 MLXIPQ9HAP2 919 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 KCNH7Q9NS40 1196 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CPSF2Q9P2I0 782 aaKnown RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 CGGBP1Q9UFW8 167 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ITGB1BP2Q9UKP3 347 aa4.87□□□□□ -1.63
SF3B1-202ENST00000409915 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-202ENST00000409915 LAMA2P24043 3122 aaKnown RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MYH7BA7E2Y1 1941 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 A0A087X0M5 115 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 A0A1B0GX30 115 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TRIM43BA6NCK2 446 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 F5H0A9 414 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MEIS1O00470 390 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 RGS13O14921 159 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MSH4O15457 936 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CHMP2AO43633 222 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SLC37A4O43826 429 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 B4GALT4O60513 344 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 NDUFS2O75306 463 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TADA3O75528 432 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 STAM2O75886 525 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CCNE2O96020 404 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MMP1P03956 469 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 LGALS2P05162 132 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CYP3A4P08684 503 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CYP2C9P11712 490 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MYF5P13349 255 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 OSMP13725 252 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TNNT1P13805 278 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CD247P20963 164 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 AGXTP21549 392 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 ITGB8P26012 769 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MARK3P27448 753 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 GJB2P29033 226 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 HNRNPH1P31943 449 aaKnown RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 HSPA7P48741 367 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 AGFG1P52594 562 aaKnown RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 YARSP54577 528 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms