RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GALK1P51570 392 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 HECTD3Q5T447 861 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 LONP2Q86WA8 852 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 ADGRG2Q8IZP9 1017 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 TTC8Q8TAM2 541 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 TAS1R2Q8TE23 839 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 FBXO32Q969P5 355 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 RNF38Q9H0F5 515 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 SDCBP2Q9H190 292 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 METTL14Q9HCE5 456 aaKnown RBP15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 RAB20Q9NX57 234 aa15.4■□□□□ 0.06
NIF3L1-205ENST00000409588 WDR87Q6ZQQ6 2873 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 FAM186AA6NE01 2351 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 PATJQ8NI35 1801 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 E2F8A0AVK6 867 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 LEFTY2O00292 366 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 PSMA7O14818 248 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 ABL1P00519 1130 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 ZDHHC11BP0C7U3 371 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 FAM200BP0CF97 657 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 RAP1GAPP47736 663 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 CACNA2D1P54289 1103 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 GAS6Q14393 721 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 PREPLQ4J6C6 727 aaPredicted RBP15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 TRIM68Q6AZZ1 485 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 ZNF276Q8N554 614 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 CAMKK1Q8N5S9 505 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 SLC2A14Q8TDB8 520 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 CYFIP2Q96F07 1278 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 UBXN6Q9BZV1 441 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 TLR8Q9NR97 1041 aaKnown RBP15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 RAB23Q9ULC3 237 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 COQ4Q9Y3A0 265 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 FANCMQ8IYD8 2048 aa15.39■□□□□ 0.05
NIF3L1-205ENST00000409588 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 CFAP54Q96N23 3096 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 OTOL1A6NHN0 477 aaPredicted RBP15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 PMM2O15305 246 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 CILPO75339 1184 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 ARSAP15289 507 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 SDHBP21912 280 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 EIF2DP41214 584 aaKnown RBP15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 MXI1P50539 228 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 SLC5A3P53794 718 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 FOXK2Q01167 660 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 SATB1Q01826 763 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 ANKRD40Q6AI12 368 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 TSSK4Q6SA08 328 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 FILIP1Q7Z7B0 1213 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 TADA2BQ86TJ2 420 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 CD101Q93033 1021 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 KRT82Q9NSB4 513 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 TMEM30AQ9NV96 361 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 ARMCX3Q9UH62 379 aaPredicted RBP15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 CHORDC1Q9UHD1 332 aaPredicted RBP15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 CPQQ9Y646 472 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 PTPRDP23468 1912 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 GREB1Q4ZG55 1949 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 COL4A3Q01955 1670 aa15.38■□□□□ 0.05
NIF3L1-205ENST00000409588 ZNF292O60281 2723 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 FOXD2O60548 495 aaPredicted RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 MBL2P11226 248 aaPredicted RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SLC8A3P57103 927 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 YWHAEP62258 255 aaKnown RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 CETN1Q12798 172 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SPOPLQ6IQ16 392 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 FSTL4Q6MZW2 842 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 KLHDC10Q6PID8 442 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SMYD4Q8IYR2 804 aaPredicted RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 C12orf29Q8N999 325 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SCAMP5Q8TAC9 235 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 CEP63Q96MT8 703 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 CDK5RAP1Q96SZ6 601 aaKnown RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SMOQ99835 787 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 HINFPQ9BQA5 517 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 LINC00597Q9H2U6 94 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 APOBEC3GQ9HC16 384 aaKnown RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 RBM12Q9NTZ6 932 aaKnown RBP15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 KIAA1257Q9ULG3 409 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SLC8A2Q9UPR5 921 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 SCML2Q9UQR0 700 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 WNT6Q9Y6F9 365 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 OBSL1O75147 1896 aa15.37■□□□□ 0.05
NIF3L1-205ENST00000409588 KIF26AQ9ULI4 1882 aaPredicted RBP15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 A0A0A0MRY4 1105 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 BICDL2A1A5D9 508 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 K7ESF4 209 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 LRP3O75074 770 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 ADH1CP00326 375 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 MAP3K7CLP57077 242 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 ZXDBP98169 803 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 GOLGA8FQ08AF8 430 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 GOLGA8DPQ0D2H9 430 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 LAIR1Q6GTX8 287 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 TMEM92Q6UXU6 159 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms