RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 MFSD7Q6UXD7 560 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 FDXACB1Q9BRP7 624 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 GANQ9H2C0 597 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 PGK2P07205 417 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 TAL1P17542 331 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 BST2Q10589 180 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 IL17AQ16552 155 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 FBXO16Q8IX29 292 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 NUP93Q8N1F7 819 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 UBE2OQ9C0C9 1292 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 EPHB6O15197 1021 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 TOMM70O94826 608 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 PAEPP09466 180 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 PECAM1P16284 738 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 PPP3CAQ08209 521 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 EFCAB1Q9HAE3 211 aa17.68■□□□□ 0.42
TRAPPC11-201ENST00000334690 WTIPA6NIX2 430 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SLCO1B7G3V0H7 640 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZBTB39O15060 712 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 MGAT5Q09328 741 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 MGAT5BQ3V5L5 792 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 ATP6V0D2Q8N8Y2 350 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 THAP11Q96EK4 314 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 CHCHD3Q9NX63 227 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 DLGAP2Q9P1A6 1054 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 C17orf102A2RUQ5 167 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 H3BRB1 525 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 PTPN4P29074 926 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 KPNB1Q14974 876 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 FBXO47Q5MNV8 452 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 PTRHD1Q6GMV3 140 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SGF29Q96ES7 293 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 TUT1Q9H6E5 874 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZFYVE28Q9HCC9 887 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SRRM3A6NNA2 597 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SUPT3HB4E1H0 165 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 RALBP11234 206 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 PBX1P40424 430 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 OR1G1P47890 313 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 NUDT2P50583 147 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 FOXD4Q12950 439 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SPDYAQ5MJ70 313 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 MTDHQ86UE4 582 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 UNC45BQ8IWX7 931 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 ADGRF2Q8IZF7 708 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SEPT5Q99719 369 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 TRIM45Q9H8W5 580 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 NINJ2Q9NZG7 142 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 CD274Q9NZQ7 290 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 CYB561D2O14569 222 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 DRG2P55039 364 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 AQP5P55064 265 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 KCNK10P57789 538 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 TGFB2P61812 414 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 TWF1Q12792 350 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 TIGD7Q6NT04 549 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZDHHC17Q8IUH5 632 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 APLFQ8IW19 511 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 ZFPM1Q8IX07 1006 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 KATNAL2Q8IYT4 538 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 PKP3Q9Y446 797 aa17.67■□□□□ 0.42
TRAPPC11-201ENST00000334690 SOAT2O75908 522 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 HSPA13P48723 471 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 HARS2P49590 506 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 SH3GL3Q99963 347 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 WNT10BO00744 389 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 RPLP2P05387 115 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 TCN1P20061 433 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 ELK3P41970 407 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 RAP1GAPP47736 663 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 IFI35P80217 286 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 RASA2Q15283 850 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 MUC3BQ9H195 1237 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 PDP2Q9P2J9 529 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 TSPAN16Q9UKR8 245 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 ACOT9Q9Y305 439 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 VTNP04004 478 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 MAP4P27816 1152 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 GTF2BQ00403 316 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 MPP3Q13368 585 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 NFIL3Q16649 462 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 C10orf120Q5SQS8 335 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 SCUBE1Q8IWY4 988 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 RAET1EQ8TD07 263 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 MOSPD1Q9UJG1 213 aa17.66■□□□□ 0.42
TRAPPC11-201ENST00000334690 INSRRP14616 1297 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 CPA3P15088 417 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 NT5DC4Q86YG4 428 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 CLEC4FQ8N1N0 589 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 ASTN1O14525 1302 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 RCCD1A6NED2 376 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 CFAP99D6REC4 459 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 CLASP2O75122 1294 aaKnown RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 RHOBTB1O94844 696 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 SEC24DO94855 1032 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 GTF2A2P52657 109 aa17.65■□□□□ 0.42
TRAPPC11-201ENST00000334690 GRIK5Q16478 980 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms