RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.31
SFXN1-201ENST00000321442 CHST13Q8NET6 341 aa17.02■□□□□ 0.31
SFXN1-201ENST00000321442 USP33Q8TEY7 942 aa17.02■□□□□ 0.31
SFXN1-201ENST00000321442 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.31
SFXN1-201ENST00000321442 LRRC19Q9H756 370 aa17.02■□□□□ 0.31
SFXN1-201ENST00000321442 IL1RL2Q9HB29 575 aa17.02■□□□□ 0.31
SFXN1-201ENST00000321442 CISHQ9NSE2 258 aa17.02■□□□□ 0.31
SFXN1-201ENST00000321442 DDX18Q9NVP1 670 aaKnown RBP17.02■□□□□ 0.31
SFXN1-201ENST00000321442 OATP04181 439 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 GJB1P08034 283 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 CETPP11597 493 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 KBTBD12Q3ZCT8 623 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 LACTB2Q53H82 288 aaPredicted RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 FSD1LQ9BXM9 530 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 RPS6KL1Q9Y6S9 549 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 FRMPD4Q14CM0 1322 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 XPOTO43592 962 aaKnown RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 ADRB2P07550 413 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 KCNA4P22459 653 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 FAM117BQ6P1L5 589 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 CPNE8Q86YQ8 564 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 ZCCHC9Q8N567 271 aaKnown RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 FAM13CQ8NE31 585 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 TAGLN3Q9UI15 199 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 APPL1Q9UKG1 709 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 SLC39A10Q9ULF5 831 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 EFNA5P52803 228 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 PDCD2Q16342 344 aaPredicted RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 DSTYKQ6XUX3 929 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 TMC2Q8TDI7 906 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 SKA2Q8WVK7 121 aaPredicted RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 ZNF184Q99676 751 aaPredicted RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 TAC1P20366 129 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 AP3M2P53677 418 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 TRMT5Q32P41 509 aaKnown RBP17.01■□□□□ 0.31
SFXN1-201ENST00000321442 NRBF2Q96F24 287 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 STARD13Q9Y3M8 1113 aa17.01■□□□□ 0.31
SFXN1-201ENST00000321442 MYH8P13535 1937 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 C5P01031 1676 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 NCANO14594 1321 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 TM9SF1O15321 606 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 GPD1P21695 349 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 MCL1Q07820 350 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 MYBPC2Q14324 1141 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 ARL13BQ3SXY8 428 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 EFHC1Q5JVL4 640 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 RNF43Q68DV7 783 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 CCDC60Q8IWA6 550 aaPredicted RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 SMARCAD1Q9H4L7 1026 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 PSMG1O95456 288 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 GLRBP48167 497 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 SNRPFP62306 86 aaKnown RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 RPL7AP62424 266 aaKnown RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 CYLC2Q14093 348 aaPredicted RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 PAN2Q504Q3 1202 aaKnown RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 INPP5DQ92835 1189 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 CEP41Q9BYV8 373 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 MGRN1O60291 552 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 CLPTM1O96005 669 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 RAP1GAPP47736 663 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 MARSP56192 900 aaKnown RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 IRGCQ6NXR0 463 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 OTOAQ7RTW8 1153 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 LRRC15Q8TF66 581 aa17■□□□□ 0.31
SFXN1-201ENST00000321442 AJAP1Q9UKB5 411 aaPredicted RBP17■□□□□ 0.31
SFXN1-201ENST00000321442 GSTA4O15217 222 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 EFHC2Q5JST6 749 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 C16orf46Q6P387 395 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 TLCD1Q96CP7 247 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
SFXN1-201ENST00000321442 APOL2Q9BQE5 337 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 ZCWPW1Q9H0M4 648 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 SUN2Q9UH99 717 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 CYP2C9P11712 490 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 BNIP1Q12981 228 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 PDK4Q16654 411 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 NUP93Q8N1F7 819 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 EFCAB3Q8N7B9 438 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 B4GALNT2Q8NHY0 566 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 MRIQ9BWK5 157 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 MRPL1Q9BYD6 325 aaKnown RBP16.99■□□□□ 0.31
SFXN1-201ENST00000321442 STAP1Q9ULZ2 295 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
SFXN1-201ENST00000321442 FSCN2O14926 492 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 PROCP04070 461 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 ITGB3P05106 788 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 DDIASQ8IXT1 998 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 EXOC8Q8IYI6 725 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 SHC3Q92529 594 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 GPRASP2Q96D09 838 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 C2orf40Q9H1Z8 148 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 COL20A1Q9P218 1284 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 USP18Q9UMW8 372 aa16.99■□□□□ 0.31
SFXN1-201ENST00000321442 CDY2AQ9Y6F7 541 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms