RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 ALDH7A1P49419 539 aaKnown RBP16.33■□□□□ 0.2
PPM1E-201ENST00000308249 TMEM26Q6ZUK4 368 aa16.33■□□□□ 0.2
PPM1E-201ENST00000308249 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
PPM1E-201ENST00000308249 UCMAQ8WVF2 138 aa16.33■□□□□ 0.2
PPM1E-201ENST00000308249 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
PPM1E-201ENST00000308249 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
PPM1E-201ENST00000308249 KATNA1O75449 491 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 NPTXRO95502 500 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 USP7Q93009 1102 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 PPP1R10Q96QC0 940 aaKnown RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 TRIM66O15016 1216 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 EIF3HO15372 352 aaKnown RBP eCLIP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 TRIM3O75382 744 aaPredicted RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 PCSK1P29120 753 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 PPP2R1BP30154 601 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 TGM3Q08188 693 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 USP13Q92995 863 aaPredicted RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 STRBPQ96SI9 672 aaKnown RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 HEY2Q9UBP5 337 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 ACADSBP45954 432 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 VPS9D1Q9Y2B5 631 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 SYCP2Q9BX26 1530 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 M0QYT0 321 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 EPHA7Q15375 998 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 LINC00523Q86TU6 105 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 CIPCQ9C0C6 399 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 CLPBQ9H078 707 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 HAO1Q9UJM8 370 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 ANXA9O76027 345 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 RBP3P10745 1247 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 PTPN1P18031 435 aaKnown RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 LGALS3BPQ08380 585 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 AHCYL2Q96HN2 611 aaKnown RBP16.32■□□□□ 0.2
PPM1E-201ENST00000308249 RSAD1Q9HA92 442 aa16.32■□□□□ 0.2
PPM1E-201ENST00000308249 F5H5T6 163 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SNAP23O00161 211 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SLC2A4P14672 509 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 PTSQ03393 145 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 KIAA0408Q6ZU52 694 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 DNAJC1Q96KC8 554 aaKnown RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 CD248Q9HCU0 757 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SNX12Q9UMY4 172 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 PLA2G6O60733 806 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 TCEA3O75764 348 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SEC24CP53992 1094 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 ORC1Q13415 861 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SNRNP35Q16560 246 aaKnown RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 KCTD21Q4G0X4 260 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 PPP1R18Q6NYC8 613 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 TRMT11Q7Z4G4 463 aaKnown RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 NT5DC3Q86UY8 548 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 TMEM79Q9BSE2 394 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 EFCAB1Q9HAE3 211 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SLC40A1Q9NP59 571 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 PPP2R3BQ9Y5P8 575 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 AREL1O15033 823 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SH3BGRLO75368 114 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 FAM200BP0CF97 657 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 COMTP21964 271 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 YY1P25490 414 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 HNMTP50135 292 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 OTUD3Q5T2D3 398 aaPredicted RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 BNC2Q6ZN30 1099 aaPredicted RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 UTS2BQ765I0 119 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 TRIM10Q9UDY6 481 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 RPS6KL1Q9Y6S9 549 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 EYA4O95677 639 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 WDR24Q96S15 920 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 ELOVL6Q9H5J4 265 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 FOXP2O15409 715 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 KRT33AO76009 404 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 TSPAN19P0C672 248 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 HIRAP54198 1017 aaPredicted RBP16.31■□□□□ 0.2
PPM1E-201ENST00000308249 CYP24A1Q07973 514 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 JAMLQ86YT9 394 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 PDP2Q9P2J9 529 aa16.31■□□□□ 0.2
PPM1E-201ENST00000308249 CCT8L1PA6NM43 557 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 CCNT2O60583 730 aaKnown RBP16.3■□□□□ 0.2
PPM1E-201ENST00000308249 THRAP10827 490 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 CCNG1P51959 295 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 TAF2Q6P1X5 1199 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 LRIG3Q6UXM1 1119 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 LRRC74BQ6ZQY2 392 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 SERAC1Q96JX3 654 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 DDIT4Q9NX09 232 aa16.3■□□□□ 0.2
PPM1E-201ENST00000308249 ERI2A8K979 691 aaKnown RBP16.3■□□□□ 0.2
PPM1E-201ENST00000308249 TPP2P29144 1249 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms