RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FDFT1P37268 417 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 NPTX2P47972 431 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 PTK6Q13882 451 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 SPDYE7PQ495Y7 208 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 ADGRA1Q86SQ6 560 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 OTUB1Q96FW1 271 aaPredicted RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 PRMT7Q9NVM4 692 aaPredicted RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 RUVBL2Q9Y230 463 aaKnown RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 C21orf59P57076 290 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 GTF2H3Q13889 308 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 IER5Q5VY09 327 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 ZSWIM2Q8NEG5 633 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 APOL2Q9BQE5 337 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 CYP4F12Q9HCS2 524 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 RHOBTB1O94844 696 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 BLMHQ13867 455 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 PTRHD1Q6GMV3 140 aaKnown RBP17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 MYLK2Q9H1R3 596 aa17.01■□□□□ 0.31
SH3RF1-201ENST00000284637 TSPOAP1O95153 1857 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 M0QYT0 321 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 MTSS1O43312 755 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 CLASP2O75122 1294 aaKnown RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 SMNDC1O75940 238 aaKnown RBP eCLIP17■□□□□ 0.31
SH3RF1-201ENST00000284637 PSMG1O95456 288 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 APOA4P06727 396 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 PYGMP11217 842 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 DRD4P21917 467 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 AKT1P31749 480 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 TWF1Q12792 350 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 ELMO3Q96BJ8 720 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 ATG4CQ96DT6 458 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 TMEM39BQ9GZU3 492 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 MAFGO15525 162 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 CES2O00748 559 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 CD4P01730 458 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 TKFCQ3LXA3 575 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 SEL1L3Q68CR1 1132 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 DEFB107AQ8IZN7 70 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 DIS3LQ8TF46 1054 aaKnown RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 ZFYVE19Q96K21 471 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 C17orf75Q9HAS0 396 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 CBX6O95503 412 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 POU4F1Q01851 419 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 FAM43BQ6ZT52 329 aaPredicted RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 SH3TC2Q8TF17 1288 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 SEPT8Q92599 483 aa17■□□□□ 0.31
SH3RF1-201ENST00000284637 LENG1Q96BZ8 264 aaPredicted RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17■□□□□ 0.31
SH3RF1-201ENST00000284637 RPL26L1Q9UNX3 145 aaKnown RBP17■□□□□ 0.31
SH3RF1-201ENST00000284637 PDE2AO00408 941 aaPredicted RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 MAGEB2O15479 319 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 ITPK1Q13572 414 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 FAM151AQ8WW52 585 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 TRIM63Q969Q1 353 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 CATSPERBQ9H7T0 1116 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 ELP3Q9H9T3 547 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 DDIT4Q9NX09 232 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 SERPIND1P05546 499 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 KBTBD12Q3ZCT8 623 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 SLC30A10Q6XR72 485 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 TCP10LQ8TDR4 215 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 BBS2Q9BXC9 721 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 DAPK2Q9UIK4 370 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 RARAP10276 462 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 GLRA4Q5JXX5 417 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 FAM136AQ96C01 138 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 IARS2Q9NSE4 1012 aaKnown RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 APPL1Q9UKG1 709 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 ZMYND8Q9ULU4 1186 aaPredicted RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 TM9SF1O15321 606 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 HNRNPRO43390 633 aaKnown RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 NPTXRO95502 500 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 ACER1Q8TDN7 264 aa16.99■□□□□ 0.31
SH3RF1-201ENST00000284637 SREBF1P36956 1147 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 MCL1Q07820 350 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 AGAP9Q5VTM2 703 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 TSHZ1Q6ZSZ6 1077 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ACOT1Q86TX2 421 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 SNX31Q8N9S9 440 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 STKLD1Q8NE28 680 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 FAM172AQ8WUF8 416 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ITFG2Q969R8 447 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 FRMD8P1Q9BZ68 369 aaPredicted RBP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 DDX3XO00571 662 aaKnown RBP eCLIP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms