RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W PPT2Q12036 173 aa4.59□□□□□ -1.67
LDB16YCL005W PAI3P01094 68 aa4.58□□□□□ -1.68
LDB16YCL005W UGX2P32772 223 aa4.58□□□□□ -1.68
LDB16YCL005W YRA2P36036 203 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
LDB16YCL005W YBR219CP38317 127 aa4.58□□□□□ -1.68
LDB16YCL005W YLR296WQ05898 108 aa4.58□□□□□ -1.68
LDB16YCL005W YKL023C-AQ2V2P3 75 aa4.58□□□□□ -1.68
LDB16YCL005W ADH1P00330 348 aaKnown RBP4.57□□□□□ -1.68
LDB16YCL005W RPL33AP05744 107 aaKnown RBP4.57□□□□□ -1.68
LDB16YCL005W RPL33BP41056 107 aaKnown RBP4.57□□□□□ -1.68
LDB16YCL005W YIL102C-AQ2V2P5 75 aa4.57□□□□□ -1.68
LDB16YCL005W COX14P39103 70 aa4.56□□□□□ -1.68
LDB16YCL005W YMR320WQ04897 101 aa4.56□□□□□ -1.68
LDB16YCL005W TOA2P32774 122 aa4.55□□□□□ -1.68
LDB16YCL005W YNL190WP53872 204 aa4.55□□□□□ -1.68
LDB16YCL005W YMR175W-AQ3E766 64 aa4.55□□□□□ -1.68
LDB16YCL005W MID2P36027 376 aa4.54□□□□□ -1.68
LDB16YCL005W POP7P38291 140 aa4.54□□□□□ -1.68
LDB16YCL005W RPC10P40422 70 aa4.54□□□□□ -1.68
LDB16YCL005W RTC6O14464 93 aa4.53□□□□□ -1.68
LDB16YCL005W SVP26P38869 228 aa4.53□□□□□ -1.68
LDB16YCL005W YNL198CP40166 100 aa4.53□□□□□ -1.68
LDB16YCL005W RPR2P40571 144 aa4.53□□□□□ -1.68
LDB16YCL005W CWP2P43497 92 aa4.53□□□□□ -1.68
LDB16YCL005W PBA1Q05778 276 aa4.53□□□□□ -1.68
LDB16YCL005W LSM6Q06406 86 aaKnown RBP4.53□□□□□ -1.68
LDB16YCL005W YAL065CO13511 128 aa4.52□□□□□ -1.69
LDB16YCL005W ANB1P19211 157 aa4.52□□□□□ -1.69
LDB16YCL005W NHP2P32495 156 aaPredicted RBP4.52□□□□□ -1.69
LDB16YCL005W YDL241WQ07738 123 aa4.52□□□□□ -1.69
LDB16YCL005W YLL066W-BQ8TGJ7 56 aa4.52□□□□□ -1.69
LDB16YCL005W HYP2P23301 157 aaKnown RBP4.51□□□□□ -1.69
LDB16YCL005W YHR130CP38834 111 aa4.51□□□□□ -1.69
LDB16YCL005W YDR115WQ04598 105 aa4.51□□□□□ -1.69
LDB16YCL005W YAL064WP39711 94 aa4.5□□□□□ -1.69
LDB16YCL005W YIA6P40556 373 aa4.5□□□□□ -1.69
LDB16YCL005W YLL006W-AQ3E814 58 aa4.49□□□□□ -1.69
LDB16YCL005W YOR020W-AQ3E824 90 aa4.49□□□□□ -1.69
LDB16YCL005W CPR1P14832 162 aaKnown RBP4.48□□□□□ -1.69
LDB16YCL005W YBL081WP38180 368 aaKnown RBP4.48□□□□□ -1.69
LDB16YCL005W RGM1Q00453 211 aa4.48□□□□□ -1.69
LDB16YCL005W ABF2Q02486 183 aa4.48□□□□□ -1.69
LDB16YCL005W RRT15Q3E811 62 aa4.48□□□□□ -1.69
LDB16YCL005W YAR023CD6VPM8 179 aa4.47□□□□□ -1.69
LDB16YCL005W EOS1P53938 366 aa4.47□□□□□ -1.69
LDB16YCL005W SMD1Q02260 146 aaPredicted RBP4.47□□□□□ -1.69
LDB16YCL005W AQY2P0CD90 149 aa4.46□□□□□ -1.7
LDB16YCL005W COX10P21592 462 aa4.46□□□□□ -1.7
LDB16YCL005W HPA2Q06592 156 aa4.46□□□□□ -1.7
LDB16YCL005W ARO2P28777 376 aaKnown RBP4.45□□□□□ -1.7
LDB16YCL005W MVB12P42939 101 aa4.45□□□□□ -1.7
LDB16YCL005W RPL29P05747 59 aaPredicted RBP4.43□□□□□ -1.7
LDB16YCL005W YBL039W-BP0C268 59 aa4.43□□□□□ -1.7
LDB16YCL005W MRPL24P36525 258 aaPredicted RBP4.43□□□□□ -1.7
LDB16YCL005W YFL019CP43576 117 aa4.43□□□□□ -1.7
LDB16YCL005W HUR1P45820 110 aa4.43□□□□□ -1.7
LDB16YCL005W KNH1P50112 268 aa4.43□□□□□ -1.7
LDB16YCL005W SNA2P56508 79 aa4.42□□□□□ -1.7
LDB16YCL005W YPL229WQ99395 206 aa4.42□□□□□ -1.7
LDB16YCL005W IRC21Q04772 201 aa4.41□□□□□ -1.7
LDB16YCL005W STF1P01098 86 aa4.4□□□□□ -1.71
LDB16YCL005W AIM19P40502 157 aa4.4□□□□□ -1.71
LDB16YCL005W ICY1Q04329 127 aa4.4□□□□□ -1.71
LDB16YCL005W YDR029WQ12111 104 aa4.39□□□□□ -1.71
LDB16YCL005W YOR034C-AQ3E735 80 aa4.39□□□□□ -1.71
LDB16YCL005W YGL041C-BQ3E750 60 aa4.39□□□□□ -1.71
LDB16YCL005W RPL26AP05743 127 aaKnown RBP4.38□□□□□ -1.71
LDB16YCL005W UBC4P15731 148 aa4.38□□□□□ -1.71
LDB16YCL005W DSE2P38844 325 aa4.38□□□□□ -1.71
LDB16YCL005W RPL26BP53221 127 aaKnown RBP4.38□□□□□ -1.71
LDB16YCL005W Q0032Q9ZZX7 96 aa4.38□□□□□ -1.71
LDB16YCL005W YLR236CA0A023PZG4 107 aa4.37□□□□□ -1.71
LDB16YCL005W YCR043CP25361 127 aa4.37□□□□□ -1.71
LDB16YCL005W YPR195CQ06594 109 aa4.37□□□□□ -1.71
LDB16YCL005W YPL257WQ08974 193 aa4.37□□□□□ -1.71
LDB16YCL005W ECM12O13529 151 aa4.35□□□□□ -1.71
LDB16YCL005W YDR034C-AP0C289 58 aa4.35□□□□□ -1.71
LDB16YCL005W IGD1P43598 195 aa4.35□□□□□ -1.71
LDB16YCL005W RPA12P32529 125 aaKnown RBP4.34□□□□□ -1.71
LDB16YCL005W MSA2P36157 363 aa4.34□□□□□ -1.71
LDB16YCL005W SMP1P38128 452 aa4.34□□□□□ -1.71
LDB16YCL005W ATX1P38636 73 aa4.34□□□□□ -1.71
LDB16YCL005W OST2P46964 130 aa4.34□□□□□ -1.71
LDB16YCL005W PEX22P39718 180 aa4.33□□□□□ -1.72
LDB16YCL005W MPC3P53311 146 aa4.33□□□□□ -1.72
LDB16YCL005W SLO1Q3E784 85 aa4.33□□□□□ -1.72
LDB16YCL005W YLR307C-AQ3E825 87 aa4.32□□□□□ -1.72
LDB16YCL005W YJR107C-AP0CT86 78 aa4.31□□□□□ -1.72
LDB16YCL005W FYV5P25585 152 aa4.31□□□□□ -1.72
LDB16YCL005W YCR085WP25650 117 aa4.31□□□□□ -1.72
LDB16YCL005W YBR230W-AQ3E762 66 aa4.31□□□□□ -1.72
LDB16YCL005W YJL127C-BQ3E828 52 aa4.31□□□□□ -1.72
LDB16YCL005W RUB1Q03919 77 aa4.3□□□□□ -1.72
LDB16YCL005W YNL042W-BQ3E7Z2 85 aa4.3□□□□□ -1.72
LDB16YCL005W PBI2P0CT04 75 aaKnown RBP4.29□□□□□ -1.72
LDB16YCL005W INO4P13902 151 aa4.29□□□□□ -1.72
LDB16YCL005W SFT1P43682 97 aa4.29□□□□□ -1.72
LDB16YCL005W YGL193CP53097 103 aa4.29□□□□□ -1.72
LDB16YCL005W TSC3Q3E790 80 aa4.29□□□□□ -1.72
LDB16YCL005W YER039C-AP0CD97 72 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms