RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ACADSBP45954 432 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 CDH8P55286 799 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 IPMKQ8NFU5 416 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 OR6J1Q8NGC5 347 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 ARHGAP26Q9UNA1 814 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 MAGEA13PA6NCF6 341 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 DYNC1LI2O43237 492 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-210ENST00000638567 ITGB5P18084 799 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 C16orf89Q6UX73 402 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 SAMD3Q8N6K7 520 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 ELMO2Q96JJ3 720 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 SDR42E2A6NKP2 422 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 GH1P01241 217 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 TGM2P21980 687 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 LAYNQ6UX15 382 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 FRA10AC1Q70Z53 315 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 RASGEF1CQ8N431 466 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 TMEM176AQ96HP8 235 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 TSR3Q9UJK0 312 aaKnown RBP17.27■□□□□ 0.35
SCARB2-210ENST00000638567 SPATA31A6Q5VVP1 1343 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 STAG3L1P0CL83 205 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 SNHG28P0DPA3 235 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 DSG1Q02413 1049 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 FLOT2Q14254 428 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.35
SCARB2-210ENST00000638567 ARHGEF38Q9NXL2 777 aa17.27■□□□□ 0.35
SCARB2-210ENST00000638567 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.27■□□□□ 0.35
SCARB2-210ENST00000638567 ATP6V1B1P15313 513 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 MMP13P45452 471 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 LRRC57Q8N9N7 239 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 VAV3Q9UKW4 847 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 ROBO3Q96MS0 1386 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 M0QYT0 321 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 IL10P22301 178 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 BTKQ06187 659 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 FAAP100Q0VG06 881 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 TBCCQ15814 346 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 PCSK7Q16549 785 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 PREPLQ4J6C6 727 aaPredicted RBP17.26■□□□□ 0.35
SCARB2-210ENST00000638567 FASTKD5Q7L8L6 764 aaKnown RBP17.26■□□□□ 0.35
SCARB2-210ENST00000638567 ATPAF2Q8N5M1 289 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 EML4Q9HC35 981 aaKnown RBP17.26■□□□□ 0.35
SCARB2-210ENST00000638567 CDYLQ9Y232 598 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 AKAP12Q02952 1782 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 FANCGO15287 622 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 RANBP1P43487 201 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 CXCL9Q07325 125 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 MAMLD1Q13495 774 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 SLC25A41Q8N5S1 370 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 SRPK1Q96SB4 655 aaKnown RBP17.26■□□□□ 0.35
SCARB2-210ENST00000638567 APOL2Q9BQE5 337 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 KIAA1683Q9H0B3 1180 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 ILKAPQ9H0C8 392 aaPredicted RBP17.26■□□□□ 0.35
SCARB2-210ENST00000638567 SLCO1B3Q9NPD5 702 aa17.26■□□□□ 0.35
SCARB2-210ENST00000638567 FSCN2O14926 492 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 ANGPT2O15123 496 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 AKAP10O43572 662 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 CD4P01730 458 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 SOX11P35716 441 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 FDFT1P37268 417 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 AFG1LQ8WV93 481 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 ZBTB10Q96DT7 871 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 PABPC5Q96DU9 382 aaKnown RBP17.25■□□□□ 0.35
SCARB2-210ENST00000638567 TAGLN3Q9UI15 199 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 PGK2P07205 417 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 FOXD4Q12950 439 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-210ENST00000638567 KPNB1Q14974 876 aaKnown RBP17.25■□□□□ 0.35
SCARB2-210ENST00000638567 NFIL3Q16649 462 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 PBXIP1Q96AQ6 731 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 PCDHB18PQ96TA0 734 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 KLK14Q9P0G3 267 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 NR2E1Q9Y466 385 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 AP3B1O00203 1094 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 VWA5AO00534 786 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 NCAM1P13591 858 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 WASHC2DQ5SRD0 308 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 IZUMO2Q6UXV1 221 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 GLIS2Q9BZE0 524 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-210ENST00000638567 CCDC90BQ9GZT6 254 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 PDP2Q9P2J9 529 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 KIAA1257Q9ULG3 409 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 AP4E1Q9UPM8 1137 aa17.25■□□□□ 0.35
SCARB2-210ENST00000638567 DDX3YO15523 660 aaKnown RBP17.24■□□□□ 0.35
SCARB2-210ENST00000638567 CYP2C8P10632 490 aa17.24■□□□□ 0.35
SCARB2-210ENST00000638567 MIPP30301 263 aa17.24■□□□□ 0.35
SCARB2-210ENST00000638567 SERPINB5P36952 375 aa17.24■□□□□ 0.35
SCARB2-210ENST00000638567 PDCD2Q16342 344 aaPredicted RBP17.24■□□□□ 0.35
SCARB2-210ENST00000638567 STK32AQ8WU08 396 aa17.24■□□□□ 0.35
SCARB2-210ENST00000638567 BTBD10Q9BSF8 475 aa17.24■□□□□ 0.35
SCARB2-210ENST00000638567 POLIQ9UNA4 740 aa17.24■□□□□ 0.35
SCARB2-210ENST00000638567 UNC5CO95185 931 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms