RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 LMBRD2Q68DH5 695 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 CBWD2Q8IUF1 395 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 WDR49Q8IV35 697 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 SMARCE1Q969G3 411 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 MYLPFQ96A32 169 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 CRTAC1Q9NQ79 661 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 VPS45Q9NRW7 570 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 RXFP3Q9NSD7 469 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 EHD2Q9NZN4 543 aa18.71■□□□□ 0.59
SHKBP1-203ENST00000594298 EXOC3O60645 756 aa18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 GADD45BO75293 160 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 PSMC1P62191 440 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 SNRNP35Q16560 246 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 GUF1Q8N442 669 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 TTLL2Q9BWV7 592 aa18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 DUSP15Q9H1R2 295 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-203ENST00000594298 RHOBTB1O94844 696 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 NFATC1O95644 943 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 FAM163BP0C2L3 166 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 BDNFP23560 247 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 GRIK1P39086 918 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 PPP3CCP48454 512 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 NOP14P78316 857 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 ZXDBP98169 803 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 ELF2Q15723 593 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 STPG1Q5TH74 334 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 DENND5BQ6ZUT9 1274 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 SLC9A9Q8IVB4 645 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 TTC16Q8NEE8 873 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 MYCBPAPQ8TBZ2 947 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 TMEM174Q8WUU8 243 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 PCED1BQ96HM7 432 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 FNBP1Q96RU3 617 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 LINC00597Q9H2U6 94 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 KCTD10Q9H3F6 313 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 TRPM5Q9NZQ8 1165 aa18.69■□□□□ 0.58
SHKBP1-203ENST00000594298 TRIM66O15016 1216 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 TACC1O75410 805 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 KRT37O76014 449 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 OLFM2O95897 454 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 ANXA13P27216 316 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 USP46P62068 366 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 SLC7A9P82251 487 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 CYP27A1Q02318 531 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 TRAPPC11Q7Z392 1133 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 USP33Q8TEY7 942 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 C8orf48Q96LL4 319 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 TRAF3IP3Q9Y228 551 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 PCDHA5Q9Y5H7 936 aa18.68■□□□□ 0.58
SHKBP1-203ENST00000594298 SPTBN2O15020 2390 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 GREB1Q4ZG55 1949 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 ZNF840PA6NDX5 716 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 LEFTY2O00292 366 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 PDGFRBP09619 1106 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 RPL13P26373 211 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 PMLP29590 882 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 OPRD1P41143 372 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 PSMD6Q15008 389 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 GAB4Q2WGN9 574 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 ZNF658Q5TYW1 1059 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 CLEC17AQ6ZS10 378 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 C11orf74Q86VG3 221 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 SPATA20Q8TB22 786 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 GBP4Q96PP9 640 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 LSM14BQ9BX40 385 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 FRMD4BQ9Y2L6 1034 aa18.67■□□□□ 0.58
SHKBP1-203ENST00000594298 K7EQS6 105 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 DCLK1O15075 740 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 CST3P01034 146 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 NR3C1P04150 777 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 TNNI1P19237 187 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 SHC2P98077 582 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 CYP24A1Q07973 514 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 ST3GAL2Q16842 350 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 N4BP2L1Q5TBK1 243 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 TSTD1Q8NFU3 115 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 MRPL45Q9BRJ2 306 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 RNF38Q9H0F5 515 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 SNX25Q9H3E2 840 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 SMOC1Q9H4F8 434 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 DMAC2Q9NW81 257 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 ANGPTL2Q9UKU9 493 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 NME7Q9Y5B8 376 aa18.66■□□□□ 0.58
SHKBP1-203ENST00000594298 BCLAF3A2AJT9 711 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 F8VP50 259 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 STAU1O95793 577 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 OAS1P00973 400 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 DLATP10515 647 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 PPP1R2P41236 205 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 DGKEP52429 567 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 AP3M2P53677 418 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 STIM1Q13586 685 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 NFIL3Q16649 462 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 MDH1BQ5I0G3 518 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms