RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RPAINQ86UA6 219 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 HOOK3Q86VS8 718 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 SESTD1Q86VW0 696 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 RHPN2Q8IUC4 686 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 WDR49Q8IV35 697 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 KIAA0319LQ8IZA0 1049 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 MCOLN2Q8IZK6 566 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 RNF149Q8NC42 400 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 BBOF1Q8ND07 529 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 C3orf20Q8ND61 904 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 FBF1Q8TES7 1133 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 GRK7Q8WTQ7 553 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 ALG3Q92685 438 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 BADQ92934 168 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 MAGOHBQ96A72 148 aaKnown RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 TOX2Q96NM4 488 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 TSPAN18Q96SJ8 248 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 FMO2Q99518 471 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 TCHPQ9BT92 498 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 MSTO1Q9BUK6 570 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 KIFC3Q9BVG8 833 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 MRPL4Q9BYD3 311 aaKnown RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 GCOM2Q9BZD3 368 aaPredicted RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 ZNF518BQ9C0D4 1074 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 GOLPH3Q9H4A6 298 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 FAM124BQ9H5Z6 455 aaPredicted RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 LRRC19Q9H756 370 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 TMBIM4Q9HC24 238 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 PRMT7Q9NVM4 692 aaPredicted RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 RBAKQ9NYW8 714 aaPredicted RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 GMPR2Q9P2T1 348 aaKnown RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 CNOT8Q9UFF9 292 aaKnown RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 FAM153AQ9UHL3 310 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 GGA2Q9UJY4 613 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 FNDC3AQ9Y2H6 1198 aaKnown RBP6.08□□□□□ -1.44
SDF2-206ENST00000587788 PCDHGC4Q9Y5F7 938 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 KIAA1671Q9BY89 1806 aa6.08□□□□□ -1.44
SDF2-206ENST00000587788 MYH10P35580 1976 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 RANBP2P49792 3224 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 NLRC5Q86WI3 1866 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 MROH7Q68CQ1 1323 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 ADGRA3Q8IWK6 1321 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 C17orf102A2RUQ5 167 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 DCDC2CA8MYV0 355 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 SOX1O00570 391 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 ATXN7O15265 892 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 EIF3HO15372 352 aaKnown RBP eCLIP6.07□□□□□ -1.44
SDF2-206ENST00000587788 DAPK3O43293 454 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 PSTPIP1O43586 416 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 PROSCO94903 275 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 RECKO95980 971 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 CLTAP09496 248 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 NUDT17P0C025 328 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 SMIM10L2AP0DMW4 78 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 SMIM10L2BP0DMW5 78 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 UNGP13051 313 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 SNRPBP14678 240 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 RAG1P15918 1043 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 ECHS1P30084 290 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 CYP2C18P33260 490 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 COILP38432 576 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 CRYBB1P53674 252 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 IGBP1P78318 339 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 ADAM17P78536 824 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 MRPS25P82663 173 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 ZNF200P98182 395 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 LMNB2Q03252 620 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 TNP2Q05952 138 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 CALCOCO2Q13137 446 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 DBN1Q16643 649 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 DUOXA2Q1HG44 320 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 SGSM1Q2NKQ1 1148 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 TTMPQ5BVD1 217 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 FAM47CQ5HY64 1035 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 C9orf50Q5SZB4 431 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 CEP85LQ5SZL2 805 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 DCAF12L1Q5VU92 463 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 TDRD10Q5VZ19 366 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 CDCA2Q69YH5 1023 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 ALG1LQ6GMV1 187 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 GDF6Q6KF10 455 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 MICALCLQ6ZW33 695 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 PALB2Q86YC2 1186 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 PHF13Q86YI8 300 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 SLC13A5Q86YT5 568 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 JAMLQ86YT9 394 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 BRSK2Q8IWQ3 736 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 LINC01465Q8N7H1 131 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 CCHCR1Q8TD31 782 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 ASAP3Q8TDY4 903 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 RIN2Q8WYP3 895 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 KAT5Q92993 513 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 WNT8BQ93098 351 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 VWCEQ96DN2 955 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 ZNF837Q96EG3 531 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 POP1Q99575 1024 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 ACO2Q99798 780 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 TMEM109Q9BVC6 243 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms