RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 B3GNT6Q6ZMB0 384 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ARHGAP36Q6ZRI8 547 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 MARK2Q7KZI7 788 aaKnown RBP6.45□□□□□ -1.38
SMAD4-203ENST00000585448 KRT27Q7Z3Y8 459 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 PIGWQ7Z7B1 504 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 SPATA24Q86W54 205 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 LONP2Q86WA8 852 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 DDX42Q86XP3 938 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMAD4-203ENST00000585448 TMTC1Q8IUR5 882 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 IFT20Q8IY31 132 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ZBED8Q8IZ13 594 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 NDUFAF2Q8N183 169 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 LINC01356Q8N9X3 169 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 KYQ8NBH2 561 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 TOR1AIP2Q8NFQ8 470 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 TNIP2Q8NFZ5 429 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ANKRD49Q8WVL7 239 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ATL1Q8WXF7 558 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ZNF333Q96JL9 665 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 PSKH2Q96QS6 385 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 SDF4Q9BRK5 362 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 HAUS8Q9BT25 410 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 C11orf84Q9BUA3 381 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ALDH8A1Q9H2A2 487 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ECT2Q9H8V3 914 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 C12orf10Q9HB07 376 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 SMURF1Q9HCE7 757 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 CATSPERZQ9NTU4 200 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 THEGQ9P2T0 379 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 SLC12A6Q9UHW9 1150 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ATPIF1Q9UII2 106 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 ASAP1Q9ULH1 1129 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 TBC1D30Q9Y2I9 924 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 PMF1-BGLAPU3KQ54 211 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 DNMT1P26358 1616 aaKnown RBP6.45□□□□□ -1.38
SMAD4-203ENST00000585448 GAKO14976 1311 aa6.45□□□□□ -1.38
SMAD4-203ENST00000585448 TMEM94Q12767 1356 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 hCG_2014768A0A024R1R8 64 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 CENPBD1B2RD01 187 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TMEM114B3SHH9 223 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 GCOM1H8Y6P7 765 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-203ENST00000585448 HIP1O00291 1037 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 HAT1O14929 419 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ECE2O60344 883 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ZBED1O96006 694 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 KRT6AP02538 564 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 KRT6BP04259 564 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 MYZAPP0CAP1 466 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 SRGAP2CP0DJJ0 459 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TPBGLP0DKB5 382 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 MYBL1P10243 752 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 RXRAP19793 462 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 CD9P21926 228 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 SERPINB3P29508 390 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 LIMS1P48059 325 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 AFF3P51826 1226 aaKnown RBP6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ITGA1P56199 1179 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 GJA9P57773 515 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 BNIP1Q12981 228 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 MTX1Q13505 466 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 GALNTL6Q49A17 601 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PAN2Q504Q3 1202 aaKnown RBP6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TMTC4Q5T4D3 741 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 NDUFAF5Q5TEU4 345 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PDXDC1Q6P996 788 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ABHD17CQ6PCB6 329 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 OLFM4Q6UX06 510 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 C11orf96Q7Z7L8 435 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PCGF5Q86SE9 256 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 DDX53Q86TM3 631 aaKnown RBP6.44□□□□□ -1.38
SMAD4-203ENST00000585448 CARNMT1Q8N4J0 409 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 CHCHD4Q8N4Q1 142 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 LINC00469Q8N7U9 141 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TTLL6Q8N841 843 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PIGOQ8TEQ8 1089 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 RUFY2Q8WXA3 655 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 RAPGEF5Q92565 580 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PMM1Q92871 262 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 DGCR14Q96DF8 476 aaKnown RBP6.44□□□□□ -1.38
SMAD4-203ENST00000585448 LTV1Q96GA3 475 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-203ENST00000585448 COG3Q96JB2 828 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 SCYL1Q96KG9 808 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 CEP295NLQ96MC4 621 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PWWP2AQ96N64 755 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TMEM237Q96Q45 408 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 WRNIP1Q96S55 665 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TMEM209Q96SK2 561 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 TTC1Q99614 292 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 AIFM2Q9BRQ8 373 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 YIPF4Q9BSR8 244 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 SEMA4AQ9H3S1 761 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 HAUS4Q9H6D7 363 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 DCLRE1BQ9H816 532 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 LZTFL1Q9NQ48 299 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 PLCB1Q9NQ66 1216 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ABCF3Q9NUQ8 709 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 ETNK2Q9NVF9 386 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 GID8Q9NWU2 228 aa6.44□□□□□ -1.38
SMAD4-203ENST00000585448 DDX43Q9NXZ2 648 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms