RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PRAMEF14Q5SWL7 426 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 NPNTQ6UXI9 565 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 ADGRA1Q86SQ6 560 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 LRRC56Q8IYG6 542 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 LGI4Q8N135 537 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 ZGPATQ8N5A5 531 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 FAM156AQ8NDB6 213 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 SH3RF3Q8TEJ3 882 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 CFHR4Q92496 578 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 NEIL1Q96FI4 390 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 DMRTA2Q96SC8 542 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 LBHD1Q9BQE6 289 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 LRFN3Q9BTN0 628 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 B3GNT5Q9BYG0 378 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 OSBPL5Q9H0X9 879 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 EPC1Q9H2F5 836 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 IL23AQ9NPF7 189 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 ATP11BQ9Y2G3 1177 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 MROH7-TTC4A0A0A0MT08 1334 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 RLFQ13129 1914 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 A0A1W2PRX2 142 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 H3BUI4 141 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 CNOT4O95628 575 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ZBED1O96006 694 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 CYBAP13498 195 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 RHCEP18577 417 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 CFPP27918 469 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 SMARCA1P28370 1054 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 GUCY1A2P33402 732 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ZEB1P37275 1124 aaPredicted RBP6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 RGS2P41220 211 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 TXKP42681 527 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 HK3P52790 923 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 PPP2CBP62714 309 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 PPP2CAP67775 309 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ADAM8P78325 824 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 RHDQ02161 417 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 TLE2Q04725 743 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 SAFBQ15424 915 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 KIAA0753Q2KHM9 967 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 HEATR3Q7Z4Q2 680 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 WDR63Q8IWG1 891 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 SH2D3CQ8N5H7 860 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 SHCBP1Q8NEM2 672 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 PJA1Q8NG27 643 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 LPAR1Q92633 364 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ARL8AQ96BM9 186 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 NSUN4Q96CB9 384 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 EDC3Q96F86 508 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 PAGR1Q9BTK6 254 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ARMT1Q9H993 441 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 LMBRD1Q9NUN5 540 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 HMG20BQ9P0W2 317 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 ABCF2Q9UG63 623 aa6.9□□□□□ -1.3
HERPUD1-208ENST00000563911 CHD7Q9P2D1 2997 aa6.9□□□□□ -1.31
HERPUD1-208ENST00000563911 ATAD5Q96QE3 1844 aa6.9□□□□□ -1.31
HERPUD1-208ENST00000563911 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 MATN2O00339 956 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 DNM1LO00429 736 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 CDC14BO60729 498 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 PEX14O75381 377 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 ARIH2O95376 493 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 HOXC6P09630 235 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 CR2P20023 1033 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 FPR1P21462 350 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 PCSK1P29120 753 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 MAPK4P31152 587 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 GZMKP49863 264 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 RIN1Q13671 783 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 ZNF572Q7Z3I7 529 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 ADGRE4PQ86SQ3 457 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 KIAA0319LQ8IZA0 1049 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 ZSCAN18Q8TBC5 510 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 IFI44Q8TCB0 444 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 ACER1Q8TDN7 264 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 PPM1EQ8WY54 764 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 IL17RAQ96F46 866 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 SAMD11Q96NU1 681 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 LRRC37BQ96QE4 947 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 LMF1Q96S06 567 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 DPYSL5Q9BPU6 564 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 TCF25Q9BQ70 676 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 MOCS1Q9NZB8 636 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 USP25Q9UHP3 1055 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 OAZ3Q9UMX2 235 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 RUVBL1Q9Y265 456 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 ACTL7AQ9Y615 435 aa6.89□□□□□ -1.31
HERPUD1-208ENST00000563911 PMS2P1A4D2B8 440 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 CAPN8A6NHC0 703 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 CIAO1O76071 339 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 HRGP04196 525 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 RAP2AP10114 183 aa6.88□□□□□ -1.31
HERPUD1-208ENST00000563911 MALP21145 153 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms