RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
PTPN21-208ENST00000556564 ADCY6O43306 1168 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 PPP1R11O60927 126 aaPredicted RBP18.02■□□□□ 0.47
PTPN21-208ENST00000556564 LSM8O95777 96 aaKnown RBP18.02■□□□□ 0.47
PTPN21-208ENST00000556564 ITIH2P19823 946 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 PBLDP30039 288 aaPredicted RBP18.02■□□□□ 0.47
PTPN21-208ENST00000556564 LIG3P49916 1009 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 FBXW4P57775 412 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 PRKCZQ05513 592 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 NAPEPLDQ6IQ20 393 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 C16orf59Q7L2K0 433 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 RBM23Q86U06 439 aaKnown RBP18.02■□□□□ 0.47
PTPN21-208ENST00000556564 C7orf61Q8IZ16 206 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 SLAIN1Q8ND83 568 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 TRIM66O15016 1216 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 MTSS1O43312 755 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 ITGA8P53708 1063 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.02■□□□□ 0.47
PTPN21-208ENST00000556564 ZNF571Q7Z3V5 609 aaPredicted RBP18.02■□□□□ 0.47
PTPN21-208ENST00000556564 CSGALNACT1Q8TDX6 532 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 FTHL17Q9BXU8 183 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 DCTN4Q9UJW0 460 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 NUDT5Q9UKK9 219 aa18.02■□□□□ 0.47
PTPN21-208ENST00000556564 ZNF142P52746 1687 aaPredicted RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 B4GALT5O43286 388 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ANXA9O76027 345 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 POLBP06746 335 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 CASP5P51878 434 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 TRIM48Q8IWZ4 208 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 TRAF3IP3Q9Y228 551 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 PPP3CCP48454 512 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 LONRF1Q17RB8 773 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 DUSP28Q4G0W2 176 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ARMC6Q6NXE6 501 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 JAMLQ86YT9 394 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ABRAQ8N0Z2 381 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 TSPAN17Q96FV3 270 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ZSWIM1Q9BR11 485 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 CENPKQ9BS16 269 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ELOVL4Q9GZR5 314 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ZNF212Q9UDV6 495 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 STX7O15400 261 aaKnown RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 PPFIA2O75334 1257 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 RTN3O95197 1032 aaPredicted RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 VCPP55072 806 aaKnown RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 TBC1D19Q8N5T2 526 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 PDCD7Q8N8D1 485 aaKnown RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 FZD9O00144 591 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 GTF2A1P52655 376 aaPredicted RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 GEMP55040 296 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ZBTB41Q5SVQ8 909 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 TRIM68Q6AZZ1 485 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 TIGD7Q6NT04 549 aaPredicted RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 CELF6Q96J87 481 aaKnown RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 ACO2Q99798 780 aaKnown RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 COG4Q9H9E3 785 aa18.01■□□□□ 0.47
PTPN21-208ENST00000556564 EML4Q9HC35 981 aaKnown RBP18.01■□□□□ 0.47
PTPN21-208ENST00000556564 CFAP99D6REC4 459 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 RAD51CO43502 376 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 CCR1P32246 355 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 PDK2Q15119 407 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 NT5DC4Q86YG4 428 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 ATG4AQ8WYN0 398 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 HMOX2P30519 316 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 GLIS3Q8NEA6 775 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 UROC1Q96N76 676 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 CYTH2Q99418 400 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 DNAJC7Q99615 494 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 UXTQ9UBK9 157 aaPredicted RBP18■□□□□ 0.47
PTPN21-208ENST00000556564 ORC6Q9Y5N6 252 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 ARHGAP10A1A4S6 786 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 COILP38432 576 aaPredicted RBP18■□□□□ 0.47
PTPN21-208ENST00000556564 LBX2Q6XYB7 198 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 CACUL1Q86Y37 369 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 NKX2-3Q8TAU0 364 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 CNPY3Q9BT09 278 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 NT5MQ9NPB1 228 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 L3MBTL1Q9Y468 752 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 NT5C1B-RDH14C9J2C7 533 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 RHOBTB1O94844 696 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 PDCLQ13371 301 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 IL17AQ16552 155 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 ZNF669Q96BR6 464 aaPredicted RBP18■□□□□ 0.47
PTPN21-208ENST00000556564 GPR20Q99678 358 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 TASP1Q9H6P5 420 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 PCMTD2Q9NV79 361 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 INHAP05111 366 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 PHEXP78562 749 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 ZNF200P98182 395 aaPredicted RBP18■□□□□ 0.47
PTPN21-208ENST00000556564 CRHR2Q13324 411 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 SPDYAQ5MJ70 313 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 TNFSF13BQ9Y275 285 aa18■□□□□ 0.47
PTPN21-208ENST00000556564 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 C2orf81A6NN90 581 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 ASGR1P07306 291 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 TUFMP49411 452 aaKnown RBP17.99■□□□□ 0.47
PTPN21-208ENST00000556564 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
PTPN21-208ENST00000556564 ZNF606Q8WXB4 792 aa17.99■□□□□ 0.47
PTPN21-208ENST00000556564 MAML3Q96JK9 1138 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms