RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 C11orf74Q86VG3 221 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 MON1AQ86VX9 555 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 SPATA2LQ8IUW3 424 aaPredicted RBP12.67□□□□□ -0.38
GABPB1-206ENST00000543881 SCN4BQ8IWT1 228 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 C12orf56Q8IXR9 622 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 CPA6Q8N4T0 437 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 XXYLT1Q8NBI6 393 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 PLEKHO2Q8TD55 490 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
GABPB1-206ENST00000543881 CCDC127Q96BQ5 260 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 TRMT2BQ96GJ1 504 aaKnown RBP12.67□□□□□ -0.38
GABPB1-206ENST00000543881 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
GABPB1-206ENST00000543881 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 CGRRF1Q99675 332 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 SYT15Q9BQS2 421 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 MRPL45Q9BRJ2 306 aaKnown RBP12.67□□□□□ -0.38
GABPB1-206ENST00000543881 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 ECT2Q9H8V3 914 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 ZFYVE26Q68DK2 2539 aa12.67□□□□□ -0.38
GABPB1-206ENST00000543881 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 TNNI1P19237 187 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 WARSP23381 471 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 MAGEA11P43364 429 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 CASP4P49662 377 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 SNRPFP62306 86 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 IRX4P78413 519 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 UAP1L1Q3KQV9 507 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 TSTD1Q8NFU3 115 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 CD101Q93033 1021 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 FNBP1Q96RU3 617 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 DUS2Q9NX74 493 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 ZDHHC9Q9Y397 364 aa12.66□□□□□ -0.38
GABPB1-206ENST00000543881 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
GABPB1-206ENST00000543881 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 SLFN14P0C7P3 912 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 BCKDHBP21953 392 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 BDNFP23560 247 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 RING1Q06587 406 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 STK4Q13043 487 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 ZNF268Q14587 947 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-206ENST00000543881 MTF1Q14872 753 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 KIAA1211LQ6NV74 962 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 KIAA0895Q8NCT3 520 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 DEFB124Q8NES8 71 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 OSCP1Q8WVF1 389 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 ATP2A3Q93084 1043 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 PAGE5Q96GU1 130 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 PCED1BQ96HM7 432 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 XYLT2Q9H1B5 865 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 MAGEC2Q9UBF1 373 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-206ENST00000543881 UXTQ9UBK9 157 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-206ENST00000543881 AKAP13Q12802 2813 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 PTPRDP23468 1912 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 A0A1B0GVL5 298 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 TACC1O75410 805 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 PFKFB1P16118 471 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-206ENST00000543881 DHPSP49366 369 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-206ENST00000543881 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 MYL6P60660 151 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 USP46P62068 366 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 CYP27A1Q02318 531 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 FAM160A1Q05DH4 1040 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 ANO7Q6IWH7 933 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 C4orf50Q6ZRC1 276 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 RASSF3Q86WH2 238 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 CEP57L1Q8IYX8 460 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 PIGKQ92643 395 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 DPEP3Q9H4B8 488 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 CGNQ9P2M7 1197 aaKnown RBP12.65□□□□□ -0.38
GABPB1-206ENST00000543881 LHX6Q9UPM6 363 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 NEUROG3Q9Y4Z2 214 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 WNT6Q9Y6F9 365 aa12.65□□□□□ -0.38
GABPB1-206ENST00000543881 ASCC3Q8N3C0 2202 aaKnown RBP12.65□□□□□ -0.39
GABPB1-206ENST00000543881 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 FASNP49327 2511 aaKnown RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 HYAL3O43820 417 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 EXOC3O60645 756 aa12.64□□□□□ -0.39
GABPB1-206ENST00000543881 STAU1O95793 577 aaKnown RBP12.64□□□□□ -0.39
GABPB1-206ENST00000543881 CMA1P23946 247 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms