RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NFICP08651 508 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 CYP2F1P24903 491 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 PSMA5P28066 241 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 NTSR1P30989 418 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 TLE3Q04726 772 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 STRN3Q13033 797 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 CCDC157Q569K6 752 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 IL27RAQ6UWB1 636 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 FMNL3Q8IVF7 1028 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 LEO1Q8WVC0 666 aaPredicted RBP14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 BAP1Q92560 729 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 DRC1Q96MC2 740 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 NTPCRQ9BSD7 190 aaKnown RBP14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 SEMA4CQ9C0C4 833 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 CCSER1Q9C0I3 900 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 ABCB6Q9NP58 842 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 TCHHQ07283 1943 aa14.91□□□□□ -0.02
NKX3-1-202ENST00000523261 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 TBC1D3BA6NDS4 549 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 MEI4A8MW99 385 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 SLC9A3R1O14745 358 aaPredicted RBP14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 SCAMP3O14828 347 aaKnown RBP14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 FAM189A1O60320 539 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 ADH1CP00326 375 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 ADH5P11766 374 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 MATR3P43243 847 aaKnown RBP eCLIP14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 PDE6CP51160 858 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 CXADRP78310 365 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 C6orf118Q5T5N4 469 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 JADE1Q6IE81 842 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 SLC6A17Q9H1V8 727 aa14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 UBR5O95071 2799 aaPredicted RBP14.9□□□□□ -0.02
NKX3-1-202ENST00000523261 ZBTB24O43167 697 aaPredicted RBP14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 CDKL5O76039 1030 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 MAPTP10636 758 aaKnown RBP14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 PFKLP17858 780 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 CCT6AP40227 531 aaKnown RBP14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 SLC7A9P82251 487 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 TSPY1Q01534 308 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 SUZ12Q15022 739 aaKnown RBP14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 ETFBKMTQ8IXQ9 262 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 TMEM161BQ8NDZ6 487 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 MRGPRX1Q96LB2 322 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 ACOX2Q99424 681 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 MIR1-1HGQ9H1L0 117 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 RPF1Q9H9Y2 349 aaKnown RBP14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 C17orf75Q9HAS0 396 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 GMIPQ9P107 970 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 AK5Q9Y6K8 562 aa14.89□□□□□ -0.03
NKX3-1-202ENST00000523261 SFI1A8K8P3 1242 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 BCAT2O15382 392 aaPredicted RBP14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 NCAM1P13591 858 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 C6P13671 934 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 CD6P30203 668 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 MCM7P33993 719 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 TAF6P49848 677 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 CLDN6P56747 220 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 RTP5Q14D33 572 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 PREPLQ4J6C6 727 aaPredicted RBP14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 BMP2KLQ5H9B9 411 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 LY6G5CQ5SRR4 150 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 C10orf76Q5T2E6 689 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 HAUS3Q68CZ6 603 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 TERB1Q8NA31 727 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 SPIRE2Q8WWL2 714 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 PKMYT1Q99640 499 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 RUSC1Q9BVN2 902 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 STARD13Q9Y3M8 1113 aa14.88□□□□□ -0.03
NKX3-1-202ENST00000523261 A0A1B0GVT2 93 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 OGTO15294 1046 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 TULP3O75386 442 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 JUPP14923 745 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 IL12RB1P42701 662 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 GRK6P43250 576 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 RHDQ02161 417 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 PDIA5Q14554 519 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 TMEM132DQ14C87 1099 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 KYAT1Q16773 422 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 CCDC142Q17RM4 750 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 CD302Q8IX05 232 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 SPACA3Q8IXA5 215 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 NAT16Q8N8M0 369 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 C1orf216Q8TAB5 229 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 FGF11Q92914 225 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 TOE1Q96GM8 510 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 GABRG3Q99928 467 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 GPR174Q9BXC1 333 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 NRSN2Q9GZP1 204 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 RNF38Q9H0F5 515 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 SMPD4Q9NXE4 827 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms