RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PDE6CP51160 858 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 SLC7A9P82251 487 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 POU5F1Q01860 360 aaKnown RBP16.72■□□□□ 0.27
HDAC6-236ENST00000498808 SLC36A4Q6YBV0 504 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 RABEPKQ7Z6M1 372 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 TMEM86AQ8N2M4 240 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 KIAA1958Q8N8K9 716 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 CXorf38Q8TB03 319 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 RNF38Q9H0F5 515 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 AGAP1Q9UPQ3 857 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 CPQQ9Y646 472 aa16.72■□□□□ 0.27
HDAC6-236ENST00000498808 URB1O60287 2271 aaKnown RBP16.71■□□□□ 0.27
HDAC6-236ENST00000498808 IGHV1OR15-9A0A0B4J2B8 117 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 GABRDO14764 452 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 ATP2C2O75185 946 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 OLFM2O95897 454 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 ITGB3P05106 788 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 TNFRSF4P43489 277 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 SLC14A1Q13336 389 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 DHX8Q14562 1220 aaKnown RBP16.71■□□□□ 0.27
HDAC6-236ENST00000498808 SLFN12LQ6IEE8 588 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 FAM171BQ6P995 826 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 NAXDQ8IW45 347 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 LRIG1Q96JA1 1093 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 SPATA17Q96L03 361 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 TRPM5Q9NZQ8 1165 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 HCN2Q9UL51 889 aa16.71■□□□□ 0.27
HDAC6-236ENST00000498808 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 VWA3AA6NCI4 1184 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 ZNF840PA6NDX5 716 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 SLC9A3R1O14745 358 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-236ENST00000498808 IL18RAPO95256 599 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 SYPP08247 313 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 ADH5P11766 374 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 ADSSP30520 456 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
HDAC6-236ENST00000498808 TFAMQ00059 246 aaKnown RBP16.7■□□□□ 0.26
HDAC6-236ENST00000498808 ADGRF2Q8IZF7 708 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 HSPA12BQ96MM6 686 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 TTLL2Q9BWV7 592 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 ZHX3Q9H4I2 956 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 SCUBE2Q9NQ36 999 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 BLOC1S4Q9NUP1 217 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 GDAP2Q9NXN4 497 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 CFAP97Q9P2B7 532 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 PCDHB9Q9Y5E1 797 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
HDAC6-236ENST00000498808 ASH1LQ9NR48 2969 aaKnown RBP16.69■□□□□ 0.26
HDAC6-236ENST00000498808 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-236ENST00000498808 ADH1CP00326 375 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 OAS1P00973 400 aaKnown RBP16.69■□□□□ 0.26
HDAC6-236ENST00000498808 PLCG1P19174 1290 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 PCSK1P29120 753 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
HDAC6-236ENST00000498808 LY6G5CQ5SRR4 150 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 MIB1Q86YT6 1006 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 ETFBKMTQ8IXQ9 262 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 LRRC52Q8N7C0 313 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 ZNF513Q8N8E2 541 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-236ENST00000498808 TRIML1Q8N9V2 468 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 ZSWIM2Q8NEG5 633 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 MYLPFQ96A32 169 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 CRTAC1Q9NQ79 661 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
HDAC6-236ENST00000498808 A0A1W2PQF6 199 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 CBFA2T3O75081 653 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 HOXB2P14652 356 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 BDNFP23560 247 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 ABCD1P33897 745 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 WASP42768 502 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 LHX1P48742 406 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 MCM6Q14566 821 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 PLEKHG6Q3KR16 790 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 VSTM1Q6UX27 236 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 C4orf50Q6ZRC1 276 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 TOGARAM2Q6ZUX3 1019 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 BRSK2Q8IWQ3 736 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 TOP6BLQ8N6T0 577 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 SYT15Q9BQS2 421 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 ST6GALNAC4Q9H4F1 302 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 CD248Q9HCU0 757 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 CD93Q9NPY3 652 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 CACNA2D2Q9NY47 1150 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 MAGEC2Q9UBF1 373 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-236ENST00000498808 CYP8B1Q9UNU6 501 aa16.68■□□□□ 0.26
HDAC6-236ENST00000498808 APOBEC2Q9Y235 224 aaKnown RBP16.68■□□□□ 0.26
HDAC6-236ENST00000498808 BPTFQ12830 3046 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 TBC1D3BA6NDS4 549 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 EIF4E1BA6NMX2 242 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms