RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FTSJ3Q8IY81 847 aaKnown RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 RDH13Q8NBN7 331 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 PRR7Q8TB68 274 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 NUP58Q9BVL2 599 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 SPZ1Q9BXG8 430 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 ACE2Q9BYF1 805 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 ABCG4Q9H172 646 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 PTPRHQ9HD43 1115 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 MN1Q10571 1320 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 RTTNQ86VV8 2226 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 TRAV19A0A0A6YYK7 116 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 PRR19A6NJB7 356 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 SCAMP3O14828 347 aaKnown RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 YKT6O15498 198 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 ASAP2O43150 1006 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 FOSP01100 380 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 C4BPAP04003 597 aaKnown RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 USP17L7P0C7H9 530 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 CALM1P0DP23 149 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 CALM2P0DP24 149 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 CALM3P0DP25 149 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 MARCKSP29966 332 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 QARSP47897 775 aaKnown RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 JAK3P52333 1124 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 SETQ01105 290 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 SFMBT2Q5VUG0 894 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 ZKSCAN2Q63HK3 967 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 HEATR3Q7Z4Q2 680 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 FILIP1Q7Z7B0 1213 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 METTL3Q86U44 580 aaKnown RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 CACUL1Q86Y37 369 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 NOSTRINQ8IVI9 506 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 FAM9BQ8IZU0 186 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 PHTF2Q8N3S3 785 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 ZNF579Q8NAF0 562 aaKnown RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 CPT1CQ8TCG5 803 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 SUSD3Q96L08 255 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 HEXIM2Q96MH2 286 aaKnown RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 GABRG3Q99928 467 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 UNC45AQ9H3U1 944 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 CBX8Q9HC52 389 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 SENP2Q9HC62 589 aa7.16□□□□□ -1.26
HDAC3-206ENST00000471968 TIMM13Q9Y5L4 95 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 ARHGEF17Q96PE2 2063 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-206ENST00000471968 VILLO15195 856 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 SIGLEC6O43699 453 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 TSPAN3O60637 253 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 FSBPO95073 299 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 LARGE1O95461 756 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ITGA2BP08514 1039 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ADH5P11766 374 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 SLC5A2P31639 672 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 SFNP31947 248 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 GRIK1P39086 918 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ARRB1P49407 418 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 TUFMP49411 452 aaKnown RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 FXR2P51116 673 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ATP2C1P98194 919 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 LACTB2Q53H82 288 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 PRR16Q569H4 304 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ZNF589Q86UQ0 364 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 JAMLQ86YT9 394 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 SIRT2Q8IXJ6 389 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 TRMT2AQ8IZ69 625 aaKnown RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ADGRG2Q8IZP9 1017 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ARL14EPQ8N8R7 260 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 TEX19Q8NA77 164 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 STKLD1Q8NE28 680 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 TCP11Q8WWU5 503 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 BIRC7Q96CA5 298 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 FAM227BQ96M60 508 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 MKRN2Q9H000 416 aaKnown RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 RUBCNLQ9H714 662 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 TMEM206Q9H813 350 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ZSWIM6Q9HCJ5 1215 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 HELLSQ9NRZ9 838 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 SEPT10Q9P0V9 454 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 MAGED2Q9UNF1 606 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-206ENST00000471968 ENTPD2Q9Y5L3 495 aa7.15□□□□□ -1.26
HDAC3-206ENST00000471968 A0A0D9SFI3 127 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 A0A1B0GVM2 712 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TMEM200CA6NKL6 621 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 OR6C75A6NL08 312 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TTLL8A6PVC2 850 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 KIAA1324LA8MWY0 1029 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-206ENST00000471968 WASH3PC4AMC7 463 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TRIM38O00635 465 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 TRIM24O15164 1050 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 GAS7O60861 476 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 OAZ2O95190 189 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 ADH1CP00326 375 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 LIPCP11150 499 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 ACADMP11310 421 aa7.14□□□□□ -1.27
HDAC3-206ENST00000471968 HMGA1P17096 107 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms