RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CTXN3Q4LDR2 81 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 KDM7AQ6ZMT4 941 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 KIAA0319LQ8IZA0 1049 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 LRRN4CLQ8ND94 238 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 GANCQ8TET4 914 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 MFSD14AQ96MC6 490 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 COL1A1P02452 1464 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 CFAP73A6NFT4 308 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 FAM107AO95990 144 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 RARAP10276 462 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 BEX3Q00994 111 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 MBOAT7Q96N66 472 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 DCLK3Q9C098 648 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 UPF3AQ9H1J1 476 aaKnown RBP14.33□□□□□ -0.12
BRAT1-203ENST00000467558 ST6GALNAC4Q9H4F1 302 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 GRID1Q9ULK0 1009 aa14.33□□□□□ -0.12
BRAT1-203ENST00000467558 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 CCDC78A2IDD5 438 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 GLTPD2A6NH11 291 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 KCNA2P16389 499 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 ZNF280DQ6N043 979 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 LNX1Q8TBB1 728 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 FBXO32Q969P5 355 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 ULK4Q96C45 1275 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 ZBTB18Q99592 522 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 ACP6Q9NPH0 428 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 PCMTD2Q9NV79 361 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 ARHGEF38Q9NXL2 777 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 TAS2R14Q9NYV8 317 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 POMCP01189 267 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 LMNAP02545 664 aaKnown RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 CNGA2Q16280 664 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 PCSK7Q16549 785 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 UNC93AQ86WB7 457 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 C12orf42Q96LP6 360 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 GBP5Q96PP8 586 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 KLF6Q99612 283 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 MUC3BQ9H195 1237 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 PHRF1Q9P1Y6 1649 aaKnown RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 RCCD1A6NED2 376 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
BRAT1-203ENST00000467558 SLC11A2P49281 568 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 SEC24CP53992 1094 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 MFSD7Q6UXD7 560 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 HDAC7Q8WUI4 952 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 ARL8AQ96BM9 186 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 AAASQ9NRG9 546 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 SHOC2Q9UQ13 582 aa14.32□□□□□ -0.12
BRAT1-203ENST00000467558 A0A0U1RQJ8 604 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ZSCAN5CA6NGD5 496 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 OPHN1O60890 802 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ERMARDQ5T6L9 678 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 MIB1Q86YT6 1006 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 KIRREL3Q8IZU9 778 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 EFHBQ8N7U6 833 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 FBXO36Q8NEA4 188 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 HASPINQ8TF76 798 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 WNK4Q96J92 1243 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 C2CD2Q9Y426 696 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 TIMM13Q9Y5L4 95 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 RNF225M0QZC1 329 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 M0R2N6 131 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 NFKBIEO00221 500 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 NVLO15381 856 aaKnown RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 NCAM2O15394 837 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ALDH2P05091 517 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SLC2A14Q8TDB8 520 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SYT17Q9BSW7 474 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 TRIM54Q9BYV2 358 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 TMBIM4Q9HC24 238 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 RPS6KL1Q9Y6S9 549 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 A0A0B4J269 797 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 TRIM49D1C9J1S8 452 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ZCWPW2Q504Y3 356 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 GJC2Q5T442 439 aaPredicted RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SCUBE3Q8IX30 993 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 OR5B17Q8NGF7 314 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 UMODL1Q5DID0 1318 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 LRP6O75581 1613 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SDR42E2A6NKP2 422 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 NFICP08651 508 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 ICAM3P32942 547 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 FMO1Q01740 532 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SLC6A3Q01959 620 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 PTGISQ16647 500 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 LVRNQ6Q4G3 990 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 KATNAL2Q8IYT4 538 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 EIF1ADQ8N9N8 165 aaKnown RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 EPS8L3Q8TE67 593 aaKnown RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 GPR20Q99678 358 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 EGFL8Q99944 293 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms